Job Description Q1PI59 Confidence 100.00% Date Thu Jan 5 12:33:30 GMT 2012 Rank 26 Aligned Residues 135 % Identity 22% Template c5mdhB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of ternary complex of porcine cytoplasmic malate2 dehydrogenase alpha-ketomalonate and tnad at 2.4 angstroms resolution Resolution 2.40 Å

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		1	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.
Predicted Secondary structure									.																																		.																													.
Query SS confidence									.																																		.																													.
Query Sequence		K	T	C	P	K	A	C	.	I	G	I	I	T	N	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	D	K	N	K	L	F	G	V	.	T	T	L	D	I	I	R	S	N	T	F	V	A	E	L	K	G	K	Q	P	G	E	V	E	V	P	V	I	.	G	G	H	S	G	V	T	I	L
Query Conservation									.																																		.																													.
Alig confidence									.																	.	.	.	.														.																													.				.
Template Conservation																										.	.	.	.																																															.
Template Sequence		K	Y	A	K	K	S	V	K	V	I	V	V	G	N	P	A	N	T	N	C	L	T	A	S	.	.	.	.	K	S	A	P	S	I	P	K	E	N	F	S	C	L	T	R	L	D	H	N	R	A	K	A	Q	I	A	L	K	L	G	V	T	S	D	D	V	K	N	V	I	I	W	G	N	H	.	S	S	T	Q	Y
Template Known Secondary structure				S		T	T							S	S	S										.	.	.	.		T		T	T	S		G	G	G																					T			G	G	G								B		S	.	S	T	T
Template Predicted Secondary structure																										.	.	.	.																																															.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.
		78	.	80	.	.	.	.	.	.	.	.	.													90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Query Sequence		P	L	L	S	Q	V	P	G	V	S	F	T	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	E	V	A	D	L	T	K	R	I	Q	N	A	G	T	E	V	V	E	A	K	A	G	G	G	S	A	T	L	S	M	G	Q	A	A	A	R	F	G	L	S	L	V	R	A	L	Q	.	.	G	E	Q	G	V	V
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.																							.	.																				.	.	.			.	.
Template Conservation																																																.	.																				.	.	.
Template Sequence		P	D	V	N	H	A	K	V	K	L	Q	A	K	E	V	G	V	Y	E	A	V	K	D	D	S	W	L	K	G	E	F	I	T	T	V	Q	Q	R	G	A	A	V	I	K	A	R	.	.	K	L	S	S	A	M	S	A	A	K	A	I	C	D	H	V	R	D	I	.	.	.	W	F	G	T	P	E	G	E	F	V
Template Known Secondary structure					T	T						T	T																	T																		.	.	S	S																		.	.	.						T	T
Template Predicted Secondary structure																																																.	.																				.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.
		144	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	M
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		267	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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