Job Description Q1PI59 Confidence 100.00% Date Thu Jan 5 12:33:30 GMT 2012 Rank 34 Aligned Residues 136 % Identity 25% Template c3tl2A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of bacillus anthracis str. ames malate dehydrogenase2 in closed conformation. Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		K	T	C	P	K	A	C	I	G	I	I	T	N	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	D	K	N	K	L	F	G	V	.	T	T	L	D	I	I	R	S	N	T	F	V	A	E	L	K	G	K	Q	P	G	E	V	E	V	P	V	I	G	G	H	S	G	V	T	I	L	P	L
Query Conservation																																										.
Alig confidence																									.	.	.	.														.																																.
Template Conservation																									.	.	.	.																																														.
Template Sequence		K	H	S	P	N	A	I	I	V	V	L	T	N	P	V	D	A	M	T	Y	S	V	F	.	.	.	.	K	E	A	G	F	P	K	E	R	V	I	G	Q	S	G	V	L	D	T	A	R	F	R	T	F	I	A	Q	E	L	N	L	S	V	K	D	I	T	G	F	V	L	G	G	H	.	G	D	D	M	V	P	L
Template Known Secondary structure					T	T								S	S										.	.	.	.							G	G	G																						T			G	G	G							B		S	.	G	G	G
Template Predicted Secondary structure																									.	.	.	.																																														.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.							.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.
Query Sequence		L	S	Q	V	P	G	V	S	.	.	.	.	.	.	F	T	E	Q	E	V	A	D	L	T	K	R	I	Q	N	A	G	T	E	V	V	E	A	K	A	G	G	G	S	A	T	L	S	M	G	Q	A	A	A	R	F	G	L	S	L	V	R	A	L	Q	G	E	Q	G	V	V	E	C
Query Conservation										.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																									.																					.	.	.
Template Conservation																																								.																					.	.	.
Template Sequence		V	R	Y	S	Y	A	G	G	I	P	L	E	T	L	I	P	K	E	R	L	E	A	I	V	E	R	T	R	K	G	G	G	E	I	V	G	L	L	.	G	N	G	S	A	Y	Y	A	P	A	A	S	L	V	E	M	T	E	A	I	.	.	.	L	K	D	Q	R	R	V	L	P	A
Template Known Secondary structure		G	G	G				T	T			G	G	G	T	S														T										.	S	S	S																		.	.	.		T	T
Template Predicted Secondary structure																																								.																					.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions