Job Description Q1PI59 Confidence 100.00% Date Thu Jan 5 12:33:30 GMT 2012 Rank 19 Aligned Residues 135 % Identity 22% Template c3fi9B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:malate dehydrogenase; PDBTitle: crystal structure of malate dehydrogenase from porphyromonas2 gingivalis Resolution 1.90 Å

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		1	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																																																									.
Query SS confidence									.																																																									.
Query Sequence		K	T	C	P	K	A	C	.	I	G	I	I	T	N	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	D	K	N	K	L	F	G	V	T	T	L	D	I	I	R	S	N	T	F	V	A	E	L	K	G	K	Q	P	G	E	V	.	E	V	P	V	I	G	G	H	S	G	V	T	I	L	P
Query Conservation									.																																																									.
Alig confidence									.																	.	.	.	.																																					.									.
Template Conservation																										.	.	.	.																																														.
Template Sequence		S	Y	C	P	D	C	K	H	V	I	I	I	F	N	P	A	D	I	T	G	L	V	T	L	.	.	.	.	I	Y	S	G	L	K	P	S	Q	V	T	T	L	A	G	L	D	S	T	R	L	Q	S	E	L	A	K	H	F	G	I	K	Q	S	L	V	T	N	T	R	T	Y	G	G	H	.	G	E	Q	M	A	V
Template Known Secondary structure					T	T								S	S	S										.	.	.	.				T			G	G	G																					T	S		G	G	G									S	S	.	G	G	G
Template Predicted Secondary structure																										.	.	.	.																																														.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.					.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.												.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	S	Q	V	P	G	V	S	.	.	.	.	.	.	.	.	.	.	.	F	T	E	Q	E	V	A	D	L	T	K	R	I	Q	N	A	G	T	E	V	V	E	A	K	A	G	G	G	S	A	T	L	S	M	G	Q	A	A	A	R	F	G	L	S	L	V	R	A	L	Q	G	E	Q	G	V	V	E	C
Query Conservation											.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.																									.	.																				.	.	.
Template Conservation																																														.	.																				.	.	.
Template Sequence		F	A	S	T	A	K	V	N	G	T	P	L	T	D	L	I	G	T	D	K	L	T	N	E	Q	W	A	E	L	K	Q	R	V	V	K	G	G	A	N	I	I	K	L	R	.	.	G	R	S	S	F	Q	S	P	S	Y	V	S	I	E	M	I	R	A	A	.	.	.	M	G	G	E	A	F	R	W	P	A
Template Known Secondary structure			G	G	G				T	T			G	G	G	T	T	T	B	T	T	B														T										.	.	S	S																		.	.	.	T	T	S	S		B		S
Template Predicted Secondary structure																																														.	.																				.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.				250	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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