Job Description Q1PI59 Confidence 100.00% Date Thu Jan 5 12:33:30 GMT 2012 Rank 32 Aligned Residues 132 % Identity 21% Template c2v6bB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:l-lactate dehydrogenase; PDBTitle: crystal structure of lactate dehydrogenase from deinococcus2 radiodurans (apo form) Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		K	T	C	P	K	A	C	I	G	I	I	T	N	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	D	K	N	K	L	F	G	V	.	T	T	L	D	I	I	R	S	N	T	F	V	A	E	L	K	G	K	Q	P	G	E	V	E	V	P	V	I	G	G	H	S	G	V	T	I	L	P	L
Query Conservation																																										.
Alig confidence																											.	.	.	.	.	.										.																																.
Template Conservation																											.	.	.	.	.	.																																										.
Template Sequence		R	A	A	P	D	A	V	L	L	V	T	S	N	P	V	D	L	L	T	D	L	A	T	Q	L	.	.	.	.	.	.	A	P	G	Q	P	V	I	G	S	G	T	V	L	D	S	A	R	F	R	H	L	M	A	Q	H	A	G	V	D	G	T	H	A	H	G	Y	V	L	G	E	H	.	G	D	S	E	V	L	A
Template Known Secondary structure					T	T	S						S	S	S												.	.	.	.	.	.		T	T	S						T	T																T	S		G	G	G							B	S	S	.	S	T	T
Template Predicted Secondary structure																											.	.	.	.	.	.																																										.
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.							.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.
		80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		L	S	Q	V	P	G	V	S	F	T	E	Q	E	.	V	A	D	L	T	K	R	I	Q	N	A	G	T	E	V	V	E	A	K	A	G	G	G	S	A	T	L	S	M	G	Q	A	A	A	R	F	G	L	S	L	V	R	A	L	Q	G	E	Q	G	V	V	E	C
Query Conservation															.
Alig confidence															.																				.	.	.																			.	.	.
Template Conservation																																			.	.	.																			.	.	.
Template Sequence		W	S	S	A	M	V	A	G	M	P	V	A	D	F	M	Q	A	Q	N	L	P	W	N	E	Q	V	R	A	K	I	D	E	G	.	.	.	T	R	T	Y	Y	G	I	G	A	A	L	A	R	I	T	E	A	V	.	.	.	L	R	D	R	R	A	V	L	T	V
Template Known Secondary structure		G	G	G				T	T										T	T				S											.	.	.																			.	.	.		T	T
Template Predicted Secondary structure																																			.	.	.																			.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.				.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions