Job Description Q1PI59 Confidence 100.00% Date Thu Jan 5 12:33:30 GMT 2012 Rank 37 Aligned Residues 134 % Identity 25% Template c2ldxA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-lactate dehydrogenase; PDBTitle: characterization of the antigenic sites on the refined 3-2 angstroms resolution structure of mouse testicular lactate3 dehydrogenase c4 Resolution 2.96 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		K	T	C	P	K	A	C	I	G	I	I	T	N	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	D	K	N	K	L	F	G	V	.	T	T	L	D	I	I	R	S	N	T	F	V	A	E	L	K	G	K	Q	P	G	E	V	E	V	P	V	I	G	G	H	S	G	V	T	I	L	P	L
Query Conservation																																										.
Alig confidence																									.	.	.	.														.																																.
Template Conservation																									.	.	.	.																																														.
Template Sequence		Q	N	S	P	D	C	K	I	I	V	V	T	N	P	V	D	I	L	T	Y	V	V	W	.	.	.	.	K	I	S	G	F	P	V	G	R	V	I	G	S	G	C	N	L	D	S	A	R	F	R	Y	L	I	G	E	K	L	G	V	N	P	T	S	C	H	G	W	V	L	G	E	H	.	G	D	S	S	V	P	I
Template Known Secondary structure				S	T	T							S	S	S										.	.	.	.					S		T	T	T					T	T																T			T	T	S	S								S	.	S	S
Template Predicted Secondary structure																									.	.	.	.																																														.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.														90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	Q	V	P	G	V	S	F	T	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	E	V	A	D	L	T	K	R	I	Q	N	A	G	T	E	V	V	E	A	K	A	G	G	G	S	A	T	L	S	M	G	Q	A	A	A	R	F	G	L	S	L	V	R	A	L	Q	G	E	Q	G	V	V	E	C
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.																			.	.	.
Template Conservation																																															.	.	.																			.	.	.
Template Sequence		W	S	G	V	N	V	A	G	V	T	L	K	S	L	N	P	A	I	G	T	D	K	N	K	Q	H	W	K	N	V	H	K	Q	V	V	E	G	G	Y	E	V	L	D	M	K	.	.	.	G	Y	T	S	W	A	I	G	L	S	V	T	D	L	A	R	S	I	.	.	.	L	K	N	L	K	R	V	H	P	V
Template Known Secondary structure		G	G	G		B	S	S		S	S	S	S	B	S	T	T	T		S		S	S	S	S	S	S																				.	.	.	S	S																	.	.	.		T	T
Template Predicted Secondary structure																																															.	.	.																			.	.	.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.				.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.				.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions