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Job DescriptionQ1PI59
Confidence100.00%DateThu Jan 5 12:33:30 GMT 2012
Rank11Aligned Residues136
% Identity27%Templatec1ur5C_
PDB info PDB header:oxidoreductaseChain: C: PDB Molecule:malate dehydrogenase; PDBTitle: stabilization of a tetrameric malate dehydrogenase by2 introduction of a disulfide bridge at the dimer/dimer3 interface
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40 .........50.........60.........70.........
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Query Sequence  KTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGV. TTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPL
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Template Sequence  PLSPNAVIIMVNNPLDAMTYLAA. . . . EVSGFPKERVIGQAGVLDAARYRTFIAMEAGVSVEDVQAMLMGGH. GDEMVPL
Template Known Secondary structure  GG
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   108.110.........120.........130 .........140.........150.........160.........170..... ....180..
 
   80....... ..90.........100.........110.........120.........130.........140.....
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Query Sequence  LSQVPGVS. . . . . . FTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVEC
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Template Sequence  PRFSCISGIPVSEFIAPDRLAQIVERTRKGGGEIVNLL. KTGSAYYAPAAATAQMVEAV. . . LKDKKRVMPV
Template Known Secondary structure  GGGTTGGGTS
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   183......190.........200.........210.........220 .........230.........240 .........250
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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