Job Description Q1PI59 Confidence 100.00% Date Thu Jan 5 12:33:30 GMT 2012 Rank 14 Aligned Residues 133 % Identity 23% Template c1ldbA_ PDB info PDB header:oxidoreductase(choh(d)-nad(a)) Chain: A: PDB Molecule:apo-l-lactate dehydrogenase; PDBTitle: structure determination and refinement of bacillus2 stearothermophilus lactate dehydrogenase Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		K	T	C	P	K	A	C	I	G	I	I	T	N	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	D	K	N	K	L	F	G	V	.	T	T	L	D	I	I	R	S	N	T	F	V	A	E	L	K	G	K	Q	P	G	E	V	E	V	P	V	I	G	G	H	S	G	V	T	I	L	P	L
Query Conservation																																										.
Alig confidence																									.	.	.	.														.																																.
Template Conservation																									.	.	.	.																																														.
Template Sequence		A	S	G	F	Q	G	L	F	L	V	A	T	N	P	V	D	I	L	T	Y	A	T	W	.	.	.	.	K	F	S	G	L	P	H	E	R	V	I	G	S	G	T	I	L	D	T	A	R	F	R	F	L	L	G	E	Y	F	S	V	A	P	Q	N	V	H	A	Y	I	I	G	E	H	.	G	D	T	E	L	P	V
Template Known Secondary structure			T	T			S							S	S										.	.	.	.							T	T	S					G	G	G	T													T	T	S		G	G	G							B		T	.	T	T	T
Template Predicted Secondary structure																									.	.	.	.																																														.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	Q	V	P	G	V	S	F	T	E	Q	E	V	A	D	L	T	K	R	I	Q	N	A	G	T	E	V	V	E	A	K	A	G	G	G	S	A	T	L	S	M	G	Q	A	A	A	R	F	G	L	S	L	V	R	A	L	Q	G	E	Q	G	V	V	E	C
Query Conservation
Alig confidence													.																					.	.	.																			.	.	.
Template Conservation													.																					.	.	.																			.	.	.
Template Sequence		W	S	Q	A	Y	I	G	V	M	P	I	.	D	L	E	R	I	F	V	N	V	R	D	A	A	Y	Q	I	I	E	K	K	.	.	.	G	A	T	Y	Y	G	I	A	M	G	L	A	R	V	T	R	A	I	.	.	.	L	H	N	E	N	A	I	L	T	V
Template Known Secondary structure			T	T				T	T				.											S	S									.	.	.	S																		.	.	.		T	T
Template Predicted Secondary structure													.																					.	.	.																			.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.				.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.				250	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions