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Job DescriptionQ1PI59
Confidence100.00%DateThu Jan 5 12:33:30 GMT 2012
Rank17Aligned Residues134
% Identity20%Templatec1ez4B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:lactate dehydrogenase; PDBTitle: crystal structure of non-allosteric l-lactate dehydrogenase2 from lactobacillus pentosus at 2.3 angstrom resolution
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40 .........50.........60.........70.........
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Query Sequence  KTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGV. TTLDIIRSNTFVAELKGKQPGEVEVPVIGGHSGVTILPL
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Template Sequence  DSGFDGIFLVAANPVDILTYATW. . . . KFSGFPKERVIGSGTSLDSSRLRVALGKQFNVDPRSVDAYIMGEH. GDSEFAA
Template Known Secondary structure  TT

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GGG
TTT

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   126...130.........140........ .150.........160.........170.........180.........190... ......200
 
   80....... ..90.........100.........110.........120.........130.........140.....
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Query Sequence  LSQVPGVS. . . . . . . . . . . FTEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVRALQGEQGVVEC
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Template Sequence  YSTATIGTRPVRDVAKEQGVSDDDLAKLEDGVRNKAYDIINLK. . . GATFYGIGTALMRISKAI. . . LRDENAVLPV
Template Known Secondary structure  GGG
TTTT

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   201........210.........220.........230.........240... ......250.........260. ........270.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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