Job Description Q1PI59 Confidence 100.00% Date Thu Jan 5 12:33:30 GMT 2012 Rank 21 Aligned Residues 134 % Identity 19% Template c1b8vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (malate dehydrogenase); PDBTitle: malate dehydrogenase from aquaspirillum arcticum Resolution 2.10 Å

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		1	.	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure					.																																						.																									.
Query SS confidence					.																																						.																									.
Query Sequence		K	T	C	.	P	K	A	C	I	G	I	I	T	N	P	V	N	T	T	V	A	I	A	A	E	V	L	K	K	A	G	V	Y	D	K	N	K	L	F	G	V	.	T	T	L	D	I	I	R	S	N	T	F	V	A	E	L	K	G	K	Q	P	G	E	V	E	.	V	P	V	I	G	G	H	S	G	V	T	I	L
Query Conservation					.																																						.																									.
Alig confidence					.																					.	.	.	.														.																									.								.
Template Conservation																										.	.	.	.																																															.
Template Sequence		A	V	A	S	R	N	I	K	V	L	V	V	G	N	P	A	N	T	N	A	Y	I	A	M	.	.	.	.	K	S	A	P	S	L	P	A	K	N	F	T	A	M	L	R	L	D	H	N	R	A	L	S	Q	I	A	A	K	T	G	K	P	V	S	S	I	E	K	L	F	V	W	G	N	H	.	S	P	T	M	Y
Template Known Secondary structure				S		T	T							S	S	S										.	.	.	.		T		T	T	S		G	G	G																					T			G	G	G			S					B		S	.	S	T	T
Template Predicted Secondary structure																										.	.	.	.																																															.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.					.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.									.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.																														.	.
Query SS confidence																		.	.	.	.	.	.	.	.																														.	.
Query Sequence		P	L	L	S	Q	V	P	G	V	S	F	T	E	Q	E	V	.	.	.	.	.	.	.	.	A	D	L	T	K	R	I	Q	N	A	G	T	E	V	V	E	A	K	A	G	G	G	S	A	T	L	S	M	G	.	.	Q	A	A	A	R	F	G	L	S	L	V	R	A	L	Q	G	E	Q	G	V	V	E	C
Query Conservation																		.	.	.	.	.	.	.	.																														.	.
Alig confidence																		.	.	.	.	.	.	.	.																			.	.	.									.	.											.	.	.
Template Conservation																																												.	.	.																					.	.	.
Template Sequence		A	D	Y	R	Y	A	Q	I	D	G	A	S	V	K	D	M	I	N	D	D	A	W	N	R	D	T	F	L	P	T	V	G	K	R	G	A	A	I	I	D	A	R	.	.	.	G	V	S	S	A	A	S	A	A	N	A	A	I	D	H	I	H	D	W	V	.	.	.	L	G	T	A	G	K	W	T	T	M
Template Known Secondary structure					S	S				T	T																T																	.	.	.	S	S																			.	.	.				T	T
Template Predicted Secondary structure																																												.	.	.																					.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.				.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.				.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions