Job Description P52043 Confidence 99.94% Date Wed Jan 25 15:20:57 GMT 2012 Rank 22 Aligned Residues 210 % Identity 18% Template d2ahua1 SCOP info NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like CoA transferase beta subunit-like Resolution 1.90

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		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	P	M	C	Q	Q	I	A	D	N	V	V	T	F	L	L	Q	E	M	A	H	G	R	I	P	P	E	F	L	P	L	Q	S	G	V	G	N	I	N	N	A	V	M	A	R	L	G	E	N	P	V	I	P	P	F	M	M	Y	S	E	V	L	Q	E	S	V	V	H	L	L	E	T	G	K	I	S	G	A	S
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.												.												.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.												.												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	N	Q	R	K	L	V	A	R	R	A	L	F	E	X	.	.	.	.	.	.	.	.	.	.	R	K	G	A	V	G	N	V	G	V	G	.	I	A	D	G	I	G	L	V	A	R	E	.	.	.	.	.	.	.	.	.	.	.	E	G	C	A	D	D	F	I	L	T	V	E	T	G	P	I	G	G	I	T
Template Known Secondary structure															T	T		.	.	.	.	.	.	.	.	.	.		T	T							S	S	.	T	T	T	T								.	.	.	.	.	.	.	.	.	.	.		T		G	G	G	S			B		T	T	S			S		B
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.												.												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.											300	.	.	.	.	.	.	.	.	.	310		.	.	.	.	.	.	.	.	.	320	.												.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	S	L	T	I	S	A	D	S	L	R	K	I	Y	D	N	M	D	Y	F	A	S	R	I	V	L	R	P	Q	E	I	S	N	N	P	E	I	I	R	R	L	G	V	I	A	L	N	V	G	L	E	F	D	I	Y	G	H	A	N	S	T	H	V	A	G	V	D	L	M	N	G	I	G	G	S	G	D	F	E
Query Conservation
Alig confidence		.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.																					.				.
Template Conservation		.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.																					.				.
Template Sequence		.	.	.	.	.	S	G	A	N	V	N	T	R	A	I	L	D	X	T	S	Q	F	D	F	Y	H	G	G	G	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.	V	C	Y	L	S	F	A	E	V	D	Q	H	G	N	V	G	V	H	K	F	.	N	G	K	.	I	X	G	T	G	G	F	I	D	I	S
Template Known Secondary structure		.	.	.	.	.					B	S		S														T	T			S	.	.	.	.	.	.	.	.	.	.	.	.	.							S				T	T	S					S			.	T	T		.					T	T
Template Predicted Secondary structure		.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.																					.				.
Template SS confidence
							342	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.														.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.		.	.	390		.	.	.	.	.	.	.	.	.	400	.
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.																.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.							.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.			.	.	.	.	.	.	440	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.																	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.																	.	.
Query Sequence		R	N	A	Y	L	S	I	F	M	A	P	S	I	A	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	I	S	T	V	V	P	M	C	S	H	V	D	H	S	.	.	.	.	.	.	E	H	S	V	K	V	I	I	T	E	Q	G	I	A	D	L	.	.	R	G	L	S	P	L	Q	R	A
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.																	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.																	.	.
Template Conservation
Template Sequence		A	T	S	K	K	I	I	F	C	G	T	L	T	A	G	S	L	K	T	E	I	A	D	G	K	L	N	I	V	Q	E	G	R	V	K	K	F	I	R	E	L	P	E	I	T	F	S	G	K	I	A	L	E	R	G	L	D	V	R	Y	I	T	E	R	A	V	F	T	L	K	E	D	G	L	H	L	I	E	I	A
Template Known Secondary structure		T	T		S								S			S	S							S	S									S			S			S			S	S		S	B								T	T								S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
		443	.	.	.		.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		R	T	I	I	.	D	N	C	A	H	P	M	Y	R	D	Y	L	H	R	Y	L	E	N	A	P	G	G	H	I	H	H	D	L	S	H	V	F	D	L	H	R	N	L	I	A	T	G	S	M
Query Conservation						.
Alig confidence						.		.	.	.	.	.	.	.							.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.							.	.	.	.	.	.
Template Sequence		P	G	V	D	L	Q	.	.	.	.	.	.	.	K	D	I	L	D	K	.	.	.	.	.	.	X	D	F	T	P	V	I	S	P	E	L	K	L	X	D	E	R	L	F	I	D	A	A	X
Template Known Secondary structure		T	T					.	.	.	.	.	.	.			T	G	G	G	.	.	.	.	.	.	S	S	S													G	G	G	G	S	S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.							.	.	.	.	.	.
Template SS confidence
		487	.	.	490	.	.								.	.	.	.	.	.							.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions