Job Description P52043 Confidence 95.79% Date Wed Jan 25 15:20:57 GMT 2012 Rank 33 Aligned Residues 144 % Identity 17% Template d1lk5a1 SCOP info NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like D-ribose-5-phosphate isomerase (RpiA), catalytic domain Resolution 1.75

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		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	C	Q	Q	I	A	D	N	V	V	T	F	L	L	Q	E	M	A	H	G	R	I	P	P	E	F	L	P	L	Q	S	G	V	G	N	I	N	N	A	V	M	A	R	L	G	E	N	P	V	I	P	P	F	M	M	Y	S	E	V	L	Q	E	S	V	V	H	L	L	E	T	G	K	I	S	G	A	S	A	S
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.																									.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.																									.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	M	K	K	I	A	A	K	E	A	L	K	F	I	.	.	.	.	.	.	.	.	.	.	E	D	D	M	V	I	G	L	G	T	G	S	T	T	A	Y	F	I	K	L	L	G	E	K	.	.	.	L	K	R	G	E	I	S	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V
Template Known Secondary structure												G	G	G		.	.	.	.	.	.	.	.	.	.		T	T								S														.	.	.			T	T	S	S		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																									.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.											.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.																				.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	T	I	S	A	D	S	L	R	K	I	Y	D	N	M	D	Y	F	A	S	R	I	V	L	R	P	Q	E	I	S	N	N	P	E	I	I	R	R	L	G	V	I	A	L	N	V	G	L	E	F	D	I	Y	G	H	A	N	S	T	H	V	A	G	V	D	L	M	N	G	I	G	G	S	G	D	F	E	R	N
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.																					.							.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.																					.							.	.	.	.	.
Template Sequence		G	V	P	T	S	Y	Q	A	K	L	L	A	I	E	H	D	I	P	I	A	S	L	D	Q	V	D	A	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	V	D	G	A	D	E	V	D	P	N	L	N	L	I	K	G	R	G	.	A	A	L	T	M	E	.	.	.	.	.	K	I	I	E	Y	R
Template Known Secondary structure					S	S										T	T			B			G	G	G		S				.	.	.	.	.	.	.	.	.	.	.	.	.							S				T	T							T	T	.	S						.	.	.	.	.						T
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.																					.							.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.														.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.						.	.	110	.	.	.
		388	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	L	S	I	F	M	A	P	S	I	A	K	E	G	K	I	S	T	V	V	P	M	C	S	H	V	D	H	S	E	H	S	V	K	V	I	I	T	E	Q	G	I	A	D	L	R
Query Conservation
Alig confidence											.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.												.	.	.	.	.
Template Sequence		A	G	T	F	I	V	L	V	D	.	.	.	.	.	.	.	E	R	K	L	V	D	Y	L	D	I	A	.	.	.	.	.	D	I	V	I	V	G	T	R	E	G	V	K	K	L	E
Template Known Secondary structure											.	.	.	.	.	.	.	G	G	G	B		S						.	.	.	.	.								T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.												.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.								.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions