Job Description P52043 Confidence 100.00% Date Wed Jan 25 15:20:57 GMT 2012 Rank 3 Aligned Residues 415 % Identity 27% Template c3gk7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:4-hydroxybutyrate coa-transferase; PDBTitle: crystal structure of 4-hydroxybutyrate coa-transferase from2 clostridium aminobutyricum Resolution 1.85 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	W	T	R	M	T	A	N	E	A	A	E	I	I	Q	H	N	D	M	V	A	F	S	G	F	T	P	A	G	S	P	K	A	L	P	T	A	I	A	R	R	A	N	E	Q	H	E	A	K	K	P	Y	Q	I	R	L	L	T	G	A	S	I	S	A	A	A	D	D	V	L	S	D	A	D	A	V	S	W	R
Query Conservation
Alig confidence																											.	.																						.	.	.	.	.	.																									.
Template Conservation																											.	.																						.	.	.	.	.	.																									.
Template Sequence		Y	E	D	R	T	C	T	A	D	E	A	V	K	S	I	K	S	G	D	R	V	L	F	A	H	.	.	C	V	A	E	P	P	V	L	V	E	A	M	V	A	N	A	A	A	Y	K	N	.	.	.	.	.	.	V	T	V	S	H	M	V	T	L	G	K	G	E	Y	S	K	P	E	Y	K	E	N	F	T	.	F
Template Known Secondary structure					T	B							G	G	G			T	T							S	.	.	G	G	G												T	G	G	G		S	S	.	.	.	.	.	.						S	S		S	S			G	G	G	S	G	G	G	T	T	T			.
Template Predicted Secondary structure																											.	.																						.	.	.	.	.	.																									.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.							.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	Y	Q	T	S	S	G	L	R	K	K	I	N	Q	G	A	V	S	F	V	D	L	H	L	S	E	V	A	Q	M	V	N	Y	G	F	F	G	D	I	D	V	A	V	I	E	A	S	A	L	A	P	D	G	R	V	W	L	T	S	G	I	G	N	A	P	T	W	L	L	R	A	K	K	V	I	I	E	L	N
Query Conservation
Alig confidence																																							.
Template Conservation																																							.
Template Sequence		E	G	W	F	T	S	P	S	T	R	G	S	I	A	E	G	H	G	Q	F	V	P	V	F	F	H	E	V	P	S	L	I	R	K	D	I	F	.	H	V	D	V	F	M	V	M	V	S	P	P	D	H	N	G	F	C	C	V	G	V	S	S	D	Y	T	M	Q	A	I	K	S	A	K	I	V	L	A	E	V	N
Template Known Secondary structure				S	S			T	T	T							T	S	S							G	G	G							T	T	T	T	.			S											T	T	S						S	B		B	T									S
Template Predicted Secondary structure																																							.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	H	D	P	R	V	A	E	L	A	D	I	V	I	P	G	A	P	P	R	R	N	S	V	S	I	F	H	A	M	D	R	V	G	T	R	Y	V	Q	I	D	P	K	K	I	V	A	V	V	E	T	N	L	P	D	A	G	N	M	L	D	K	Q	N	P	M	C	Q	Q	I	A	D	N	V	V	T	F	L	L
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Sequence		D	Q	V	P	V	V	Y	G	D	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	H	V	S	E	I	D	K	F	V	E	T	S	H	P	L	P	E	I	G	L	P	K	I	G	E	V	E	A	A	I	G	K	H	C	A	S	L	I	.
Template Known Secondary structure		T	T	S				S	B	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G		S																														T	T		.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.																														.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.						.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.
Query Sequence		Q	E	M	A	H	G	R	I	P	P	E	F	L	P	L	Q	S	G	V	G	N	I	N	N	A	V	M	A	R	L	G	E	N	P	V	I	P	P	F	M	M	Y	S	E	V	L	Q	E	S	V	V	H	L	L	E	T	G	K	I	S	G	A	S	A	S	.	.	.	.	.	S	L	T	I	S	A	D	S	L	R
Query Conservation																																																																			.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																									.	.	.																														.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																									.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	E	D	G	S	T	L	Q	L	G	I	G	A	I	P	D	A	V	L	S	Q	L	K	D	K	.	.	.	K	H	L	G	I	H	S	E	M	I	S	D	G	V	V	D	L	Y	E	A	G	V	I	D	C	S	Q	K	S	I	D	K	G	K	M	A	I	T	F	L	M	G	T	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.		T	T					B		S	S									T		T	T		.	.	.		S	B																	T	T	S	B			T	T		S	S	S	T	T	S								S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																									.	.	.
Template SS confidence
											207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																													.																																																.	.	.	.	.
Query SS confidence																													.																																																.	.	.	.	.
Query Sequence		K	I	Y	D	N	M	D	Y	F	A	S	R	I	V	L	R	P	Q	E	I	S	N	N	P	E	I	I	.	R	R	L	G	V	I	A	L	N	V	G	L	E	F	D	I	Y	G	H	A	N	S	T	H	V	A	G	V	D	L	M	N	G	I	G	G	S	G	D	F	E	R	N	A	Y	L	S	.	.	.	.	.
Query Conservation																													.																																																.	.	.	.	.
Alig confidence													.																.																										.																						.	.	.	.	.
Template Conservation													.																																										.
Template Sequence		R	L	Y	D	F	A	A	N	N	P	K	.	V	E	L	K	P	V	D	Y	I	N	H	P	S	V	V	A	Q	C	S	K	M	V	C	I	N	A	C	L	Q	V	D	F	M	G	Q	I	V	S	D	S	I	.	G	T	K	Q	F	S	G	V	G	G	Q	V	D	F	V	R	G	A	S	M	S	I	D	G	K	G
Template Known Secondary structure								T	T		T	T	.					B					T						T	T	S	T	T								S				T	T						S			.	T	T				S			T	T										T		T	T	S
Template Predicted Secondary structure													.																																										.
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.		.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.		.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
				392	.	.	.	.	.	.	.	400	.	.	.				.	.	.	.	.	.	410	.	.	.				.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.
Predicted Secondary structure		.	.													.	.	.											.	.	.
Query SS confidence		.	.													.	.	.											.	.	.
Query Sequence		.	.	I	F	M	A	P	S	I	A	K	E	G	K	.	.	.	I	S	T	V	V	P	M	C	S	H	.	.	.	V	D	H	S	E	H	S	V	K	V	I	I	T	E	Q	G	I	A	D	L	R	G	L	S	P	L	Q	R	A	R	T	I	I	D	N	C	A	H	P	M	Y	R	D	Y	L	H	R	Y	L	E
Query Conservation		.	.													.	.	.											.	.	.
Alig confidence		.	.													.	.	.											.	.	.																																		.
Template Conservation																																																																	.
Template Sequence		K	A	I	I	A	M	P	S	V	A	K	K	K	D	G	S	M	I	S	K	I	V	P	F	I	D	H	G	A	A	V	T	T	S	R	N	D	A	D	Y	V	V	T	E	Y	G	I	A	E	M	K	G	K	S	L	Q	D	R	A	R	A	L	I	.	N	I	A	H	P	D	F	K	D	E	L	K	A	E	F	E
Template Known Secondary structure									S					T	T	S					S			S	S			T	T				S	B		T	T	T							T	T						T	T												.		T	S		G	G	G
Template Predicted Secondary structure																																																																	.
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.		.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
		464	.						.	.	.	.	470	.	.
Predicted Secondary structure				.	.	.	.	.
Query SS confidence				.	.	.	.	.
Query Sequence		N	A	.	.	.	.	.	P	G	G	H	I	H	H
Query Conservation				.	.	.	.	.
Alig confidence				.	.	.	.	.
Template Conservation
Template Sequence		K	R	F	N	A	A	F	S	A	W	S	H	P	Q
Template Known Secondary structure					S	S		S	S					G	G
Template Predicted Secondary structure
Template SS confidence
		432	.	.	.	.	.	.	.	440	.	.	.	.	.