Return to main results Retrieve Phyre Job Id

Job DescriptionP52043
Confidence36.20%DateWed Jan 25 15:20:57 GMT 2012
Rank42Aligned Residues182
% Identity12%Templatec3ecsD_
PDB info PDB header:translationChain: D: PDB Molecule:translation initiation factor eif-2b subunit PDBTitle: crystal structure of human eif2b alpha
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70.........80.........
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  ANEAAEIIQHNDMVAFSGFTPAGSPKALPTAIARRANEQHEAKKPYQIRLLTGASISAAADDVLSDADAVSWRAPYQTSS
Query Conservation 
 


  
  
  
   

   
 
  
  

  
            
 
                            
 
Alig confidence 

















.....
















......









..................





Template Conservation 
  
   
  
  


  ..... 
 

   
  
    
...... 
 


 


..................
  

 
Template Sequence  ADLCHTFIKDGATILTHA. . . . . YSRVVLRVLEAAVAAKK. . . . . . RFSVYVTESQ. . . . . . . . . . . . . . . . . . PDLSGK
Template Known Secondary structure  TT

TT

S.....

TT
......



T..................TTT
Template Predicted Secondary structure 





.....



......



..................




Template SS confidence 















































































   112.......120......... 130.........140...... ...150...... ...160..
 
   90.........100.........110.........120.........130.........140.........150...... ...160......
Predicted Secondary structure 


























...



Query SS confidence 


































































. . .









Query Sequence  GLRKKINQGAVSFVDLHLSEVAQMVNYGFFGDIDVAVIEASALAPDGRVWLTSGIGNAPTWLLRAKK. . . VIIELNHYHD
Query Conservation    
     
     
   
        
     




  
  
  

 


 
          
  ...





   
Alig confidence 

























.....



































...









Template Conservation    
  
   

 

 
 



   
 ..... 

 




  
  

 
 

 

  

  

   


 
 


 

  
Template Sequence  KXAKALCHLNVPVTVVLDAAVGYIXE. . . . . KADLVIVGAEGVVENGGIINKIGTNQXAVCAKAQNKPFYVVAESFKFVR
Template Known Secondary structure  TTT


GGGGG.....G
S

S
TTS
TTTT



GGGB
S
Template Predicted Secondary structure 





.....



















Template SS confidence 















































































   163......170.........180........ .190.........200.........210.........220.........230.......
 
   167..170.........180.........190.........200.........210.........220.........230......
Predicted Secondary structure 



















































Query SS confidence 





































































Query Sequence  PRVAELADIVIPGAPPRRNSVSIFHAMDRVGTRYVQIDPKKIVAVVETNLPDAGNMLDKQNPMCQQIADN
Query Conservation         

 

        
         
     
  
 

 


   
               

  
Alig confidence 








.....































......

















Template Conservation           .....            
   

 

 


 


 

......

 
   

 
   
  
Template Sequence  LFPLNQQDV. . . . . PDKFKYKADGQDLKEEHPWVDYTAPSLITLLF. . . . . . TDLGVLTPSAVSDELIKL
Template Known Secondary structure 


SSGGGS.....
SS



S





S
GGG
S......TT
GGG
Template Predicted Secondary structure 








.....

















......





Template SS confidence 





































































   238.240...... ...250.........260.........270........ .280.........290......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions