Job Description P52043 Confidence 100.00% Date Wed Jan 25 15:20:57 GMT 2012 Rank 4 Aligned Residues 406 % Identity 27% Template c2oasA_ PDB info PDB header:transferase Chain: A: PDB Molecule:4-hydroxybutyrate coenzyme a transferase; PDBTitle: crystal structure of 4-hydroxybutyrate coenzyme a transferase (atoa)2 in complex with coa from shewanella oneidensis, northeast structural3 genomics target sor119. Resolution 2.40 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	A	N	E	A	A	E	I	I	Q	H	N	D	M	V	A	F	S	G	F	T	P	A	G	S	P	K	A	L	P	T	A	I	A	R	R	A	N	E	Q	H	E	A	K	K	P	Y	Q	I	R	L	L	T	G	A	S	I	S	A	A	A	D	D	V	L	S	D	A	D	A	V	S	W	R	A	P	Y	Q	T
Query Conservation
Alig confidence																						.	.																						.	.	.	.	.	.																									.
Template Conservation																						.	.																						.	.	.	.	.	.																									.
Template Sequence		Q	S	A	L	E	A	V	S	L	I	R	S	G	E	T	L	W	T	H	S	.	.	X	G	A	T	P	K	V	L	L	D	A	L	A	K	H	A	L	T	L	D	N	.	.	.	.	.	.	I	T	L	L	Q	L	H	T	E	G	A	E	S	L	S	H	P	S	L	L	G	H	L	R	.	H	R	C	F	F	G
Template Known Secondary structure		S	S						T	T			T	T								.	.	B	T	T													G	G	G			S	.	.	.	.	.	.						S	S	B	S	S		G	G	G	G	S	G	G	G	T	T	T			.				S	S
Template Predicted Secondary structure																						.	.																						.	.	.	.	.	.																									.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.							.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	G	L	R	K	K	I	N	Q	G	A	V	S	F	V	D	L	H	L	S	E	V	A	Q	M	V	N	Y	G	F	F	G	D	I	D	V	A	V	I	E	A	S	A	L	A	P	D	G	R	V	W	L	T	S	G	I	G	N	A	P	T	W	L	L	R	A	K	K	V	I	I	E	L	N	H	Y	H	D	P
Query Conservation
Alig confidence																																		.
Template Conservation																																		.
Template Sequence		G	V	P	T	R	P	L	L	Q	S	G	D	A	D	Y	V	P	I	F	L	S	E	V	P	K	L	F	R	S	G	E	Q	.	K	I	D	T	A	I	I	Q	V	S	P	P	D	K	H	G	X	C	S	L	G	I	S	V	E	A	T	L	A	A	C	Q	V	A	G	K	I	I	A	H	I	N	P	Q	X	P	R
Template Known Secondary structure			T	T	T						T	T	S	S							G	G	G							T	T	S	S	.			S											T	T						T	T	B		T	T									S								T	T	S
Template Predicted Secondary structure																																		.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	A	E	L	A	D	I	V	I	P	G	A	P	P	R	R	N	S	V	S	I	F	H	A	M	D	R	V	G	T	R	Y	V	Q	I	D	P	K	K	I	V	A	V	V	E	T	N	L	P	D	A	G	N	M	L	D	K	Q	N	P	M	C	Q	Q	I	A	D	N	V	V	T	F	L	L	Q	E	M	A	H
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template Sequence		T	H	G	D	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	I	D	R	F	A	A	V	Y	E	Q	S	A	S	L	P	I	H	S	F	A	T	G	D	A	V	S	L	A	I	G	Q	H	V	A	E	L	V	.	.	.	.	.	.
Template Known Secondary structure					S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			G	G	G		S																																	.	.	.	.	.	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.	.	.	.	.
Template SS confidence
		157	.	.	160	.	.																														.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.						.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																																													.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.
Query Sequence		G	R	I	P	P	E	F	L	P	L	Q	S	G	V	G	N	I	N	N	A	V	M	A	R	L	G	E	N	P	V	I	P	P	F	M	M	Y	S	E	V	L	Q	E	S	V	V	H	L	L	E	T	G	K	I	S	G	A	S	A	.	.	.	.	.	S	S	L	T	I	S	A	D	S	L	R	K	I	Y	D	N
Query Conservation																																																													.	.	.	.	.
Alig confidence		.	.	.	.																									.	.	.																													.	.	.	.	.
Template Conservation		.	.	.	.																									.	.	.
Template Sequence		.	.	.	.	R	D	G	D	C	L	Q	X	G	I	G	A	I	P	D	A	V	L	S	C	L	T	G	H	.	.	.	K	D	L	G	V	H	T	E	L	F	S	D	G	I	L	Q	L	V	E	K	G	V	I	N	N	T	K	K	R	F	Y	P	G	K	L	V	T	G	F	A	L	G	S	Q	K	L	Y	D	Y
Template Known Secondary structure		.	.	.	.		T	T							S	S									T		T	T		.	.	.		S	B			B		S												T	T	S	B			T	T		S	S	S	T	T	S				S				S
Template Predicted Secondary structure		.	.	.	.																									.	.	.
Template SS confidence
						202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.						.	.	.	.	.
Predicted Secondary structure																								.																																																.	.	.	.	.
Query SS confidence																								.																																																.	.	.	.	.
Query Sequence		M	D	Y	F	A	S	R	I	V	L	R	P	Q	E	I	S	N	N	P	E	I	I	.	R	R	L	G	V	I	A	L	N	V	G	L	E	F	D	I	Y	G	H	A	N	S	T	H	V	A	G	V	D	L	M	N	G	I	G	G	S	G	D	F	E	R	N	A	Y	L	S	.	.	.	.	.	I	F	M	A	P
Query Conservation																								.																																																.	.	.	.	.
Alig confidence								.																.																										.																						.	.	.	.	.
Template Conservation								.																																										.
Template Sequence		V	D	D	N	P	A	.	V	I	F	X	D	I	E	Q	V	N	D	T	S	I	I	R	K	N	P	N	V	X	A	I	N	S	A	L	Q	V	D	L	T	G	Q	V	C	A	D	S	I	.	G	T	K	I	Y	S	G	V	G	G	Q	X	D	F	I	R	G	A	G	L	S	E	G	G	R	S	V	I	A	L	P
Template Known Secondary structure			T	T		T	T	.										T						T	T	S	T	T								S				T	T						S			.	T	T				S			T	T											S	T	T
Template Predicted Secondary structure								.																																										.
Template SS confidence
		275	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.				.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		S	I	A	K	E	G	K	I	S	T	V	V	P	M	C	.	.	.	S	H	V	D	H	S	E	H	S	V	K	V	I	I	T	E	Q	G	I	A	D	L	R	G	L	S	P	L	Q	R	A	R	T	I	I	D	N	C	A	H	P	M	Y	R	D	Y	L	H	R	Y	L	E	N	A	P	G	G
Query Conservation																	.	.	.
Alig confidence																	.	.	.																																				.
Template Conservation																																																							.
Template Sequence		S	T	A	A	G	G	R	I	S	R	I	A	S	V	L	S	P	G	A	G	V	V	T	T	R	A	H	V	H	Y	I	V	T	E	Y	G	A	A	N	L	K	G	R	S	L	R	E	R	A	Q	A	L	I	.	N	I	A	H	P	D	F	R	E	Q	L	S	R	D	A	F	E	V	W	G	L
Template Known Secondary structure		S			T	T	T	T			S			S	S			T	T							T	T	T							T	T						T	T												.	T	T	S															T	S
Template Predicted Secondary structure																																																							.
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.		.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.