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Job DescriptionP52043
Confidence100.00%DateWed Jan 25 15:20:57 GMT 2012
Rank2Aligned Residues484
% Identity45%Templatec2g39A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:acetyl-coa hydrolase; PDBTitle: crystal structure of coenzyme a transferase from pseudomonas2 aeruginosa
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  ETQWTRMTANEAAEIIQHNDMVAFSGFTPAGSPKALPTAIARRANEQHEAKKPYQIRLLTGASISAAADDVLSDADAVSW
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Template Sequence  SLLDKVXSAAEAADLIQDGXTVGXSGFTRAGEAKAVPQALAXRAKER. . . . . PLRISLXTGASLGNDLDKQLTEAGVLAR
Template Known Secondary structure  GGGGGB

TT

TT


BTTBS


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TTTT
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   10.........20.........30.........40.........50...... ...60.........70.........80....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  RAPYQTSSGLRKKINQGAVSFVDLHLSEVAQMVNYGFFGDIDVAVIEASALAPDGRVWLTSGIGNAPTWLLRAKKVIIEL
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Template Sequence  RXPFQVDSTLRKAINAGEVXFIDQHLSETVEQLRNHQLKLPDIAVIEAAAITEQGHIVPTTSVGNSASFAIFAKQVIVEI
Template Known Secondary structure  S



TTSS



TTTTTSS


SS
TTS


SB
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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  NHYHDPRVAELADIVIPGAPPRRNSVSIFHAMDRVGTRYVQIDPKKIVAVVETNLPDAGNMLDKQNPMCQQIADNVVTFL
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Template Sequence  NLAHSTNLEGLHDIYIPTYRPTRTPIPLTRVDDRIGSTAIPIPPEKIVAIVINDQPDSPSTVLPPDGETQAIANHLIDFF
Template Known Secondary structure  TTS
GGGTTSB
B




TTS






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SBSSB


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   165....170.........180.........190.........200.........210.........220.........230.........240....
 
   242.......250.........260.........270.........280.........290.........300.........310.... .....320
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Query Sequence  LQEMAHGRIPPEFLPLQSGVGNINNAVMARLGENPVIPPFMMYSEVLQESVVHLLETGKISGASASSLTISAD. SLRKIY
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Template Sequence  KREVDAGRXSNSLGPLQAGIGSIANAVXCGLIESPF. ENLTXYSEVLQDSTFDLIDAGKLRFASGSSITLSPRRNADVFG
Template Known Secondary structure  TTSS
TT
S

SSGGGSSS
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   245....250.........260.........270.........280 .........290.........300.........310.........320...
 
   321........330.........340.........350.........360.........370.........380.........390.........400
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Query Sequence  DNMDYFASRIVLRPQEISNNPEIIRRLGVIALNVGLEFDIYGHANSTHVAGVDLMNGIGGSGDFERNAYLSIFMAPSIAK
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Template Sequence  NLERYKDK. LVLRPQEISNHPEVVRRLGIIGINTALEFDIYGNVNSTHVGGTKXXNGIGGSGDFARNAHLAIFVTKSIAK
Template Known Secondary structure  SGGGTGGG.
BT
T

STTS
SSTTT
S

TT
S

SG
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   324.....330. ........340.........350.........360.........370.........380.........390.........400..
 
   401........410.........420.........430.........440.........450.........460..... ....470........
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Query Sequence  EGKISTVVPMCSHVDHSEHSVKVIITEQGIADLRGLSPLQRARTIIDNCAHPMYRDYLHRYLENA. . PGGHIHHDLSHVF
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Template Sequence  GGNISSVVPXVSHVDHTEHDVDILVTEQGLADLRGLAPRERARVIIENCVHPSYQAPLLDYFEAACAKGGHTPHLLREAL
Template Known Secondary structure  GGTSSS
SS
SB
GGG

TT
TT

TS
TTTT

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TTTTT
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   403......410.........420.........430.........440.........450.........460.........470.........480..
 
   479480.........490..
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Query Sequence  DLHRNLIATGSMLG
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Template Conservation    
      
    
Template Sequence  AWHLNLEERGHXLA
Template Known Secondary structure  SSTT
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   483......490......
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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