Return to main results Retrieve Phyre Job Id

Job DescriptionP00562
Confidence98.18%DateThu Jan 5 10:56:45 GMT 2012
Rank117Aligned Residues138
% Identity23%Templated1lc0a1
SCOP infoNAD(P)-binding Rossmann-fold domains NAD(P)-binding Rossmann-fold domains Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
Resolution1.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   455....460.........470.........480.........490.........500.........510.........520.........530....
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  AEKRIGLVLFGKGNIGSRWLELFAREQSTLSARTGFEFVLAGVVDSRRSLLSYDGLDASRALAFFNDEAVEQDEESLFLW
Query Conservation 


 
 
 
 
 
 

      
      
    
  
 
  
  
   
    

                        
Alig confidence 




























......











..............
















..
Template Conservation   
 

 




 
  
      
      ...... 
 
        ..............               

..
Template Sequence  NSGKFGVVVVGVGRAGSVRLRDLKDPRSA. . . . . . AFLNLIGFVSRR. . . . . . . . . . . . . . ELGSLDEVRQISLEDAL. .
Template Known Secondary structure 


S

STS......TT
SS..............


TTB

..
Template Predicted Secondary structure 











......

..............





..
Template SS confidence 















































































   5....10.........20.........30... ......40..... ....50.........60..
 
   535....540.........550.........560.........570.........580.........590.........600.........610....
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  MRAHPYDDLVVLDVTASQQLADQYLDFASHGFHVISANKLAGASDSNKYRQIHDAFEKTGRHWLYNATVGAGLPINHTVR
Query Conservation           



 
           

  
 






   
       

   
        





 




  
 
Alig confidence  ...
































..
























.















Template Conservation  ...    

 
 
 

   
      

  




 ..


 
    
   
   
       . 
    
  
     
Template Sequence  . . . RSQEIDVAYICSESSSHEDYIRQFLQAGKHVLV. . EYPMTLSFAAAQELWELAAQKGRVL. HEEHVELLKNIFLKDQ
Template Known Secondary structure  ...
SS
S
GGGTT
..S
S
S
TT

.
GGG


Template Predicted Secondary structure  ...










..








.


Template SS confidence 















































































   63......70.........80.........90..... ....100.........110.........120 .........130......
 
   615....620
Predicted Secondary structure 

Query SS confidence 





Query Sequence  DLIDSG
Query Conservation      

Alig confidence 





Template Conservation   

  
Template Sequence  DIFVQK
Template Known Secondary structure 
Template Predicted Secondary structure 

Template SS confidence 





   255....260
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions