 |
Job Description | P00562 | Confidence | 97.15% | Date | Thu Jan 5 10:56:45 GMT 2012 |
Rank | 158 | Aligned Residues | 122 |
% Identity | 16% | Template | d1b7go1 |
SCOP info | NAD(P)-binding Rossmann-fold domains
| NAD(P)-binding Rossmann-fold domains
| Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
|
Resolution | 2.05 |
|
 |
  |   |
458 | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | I | G | L | V | L | F | G | K | G | N | I | G | S | R | W | L | E | L | F | A | R | E | Q | S | T | L | S | A | R | T | G | F | E | F | V | L | A | G | V | V | D | S | R | R | S | L | L | S | Y | D | G | L | D | A | S | R | A | L | A | F | F | N | D | E | A | V | E | Q | D | E | E | S | L | F | L | W | M | R | A |
Query Conservation |   |
  |
|   |
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
| . | . | . | . | . | . | . | . | . |   |
|
|   |
|
|
|
|   |
|   |   | . | . | . | . | . | . | . | . | . |
|
|   |   |
|   |   |
|   |   |
|
|   |   |
|
|
|   |   |   |   |   |   |   |
|
|
|
Template Sequence |   |
M | V | N | V | A | V | N | G | Y | G | T | I | G | K | R | V | A | D | A | I | I | K | Q | . |
. |
. |
. |
. |
. |
. |
. |
. |
P | D | M | K | L | V | G | V | A | K | T | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
P | N | Y | E | A | F | I | A | H | R | R | G | I | R | I | Y | V | P | Q | Q | S | I | K | K | F | E | E |
Template Known Secondary structure |   |
|  |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  | T |
| . | . | . | . | . | . | . | . | . | T | T |  |  |  |  |  |  |  |
| S | S | . | . | . | . | . | . | . | . | . |
| S |  |  |  |  |  |  |  |  | T | T |
|
|  |  |
|
| G | G | G |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 30 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
  |
  |   |
538 | . | 540 | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | P | Y | D | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | L | V | V | L | D | V | T | A | S | Q | Q | L | A | D | Q | Y | L | D | F | A | S | H | G | F | H | V | I | S | A | N | K | L | A | G | A | S | D | S | N | K | Y | R | Q | I | H | D | A | F | E | K | T | G | R | H | W |
Query Conservation |   |
  |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |   |
|
|   |
|
|   |
|   |   |
|   |
|
|
|
|
|
|
|
|   |   |
|
|   |   |
|
|
|
|   |
|
|
|   |
|
|   |
|
|   |   |
Template Sequence |   |
S | G | I | P | V | A | G | T | V | E | D | L | I | K | T | S | D | I | V | V | D | T | T | P | N | G | V | G | A | Q | Y | K | P | I | Y | L | Q | L | Q | R | N | A | I | F | Q | G | G | E | K | A | E | V | A | D | I | S | F | S | A | L | C | N | Y | N | E | A | L | G | K | K | Y |
Template Known Secondary structure |   |
T | T |
|
|
|
|
|
|  |  |  |  |  |  |  |
| S |  |  |  |  |
|
| S | T | T |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
| T | T | S |
| G | G | G | S | S |
|  |  |
|  |  |  |  |  |  |  |  | T | T |
| S |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|