Return to main results Retrieve Phyre Job Id

Job DescriptionP00562
Confidence64.80%DateThu Jan 5 10:56:45 GMT 2012
Rank441Aligned Residues78
% Identity15%Templatec3p2yA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:alanine dehydrogenase/pyridine nucleotide transhydrogenase; PDBTitle: crystal structure of alanine dehydrogenase/pyridine nucleotide2 transhydrogenase from mycobacterium smegmatis
Resolution1.82 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   402.......410.........420...... ...430.........440.........450...... ...460....
Predicted Secondary structure 







.....






............

Query SS confidence 
























. . . . .





























. . . . . . . . . . . .







Query Sequence  TRNPLHCHRFWQQLKGQPVEFTWQS. . . . . DDGISLVAVLRTGPTESLIQGLHQSVFRAE. . . . . . . . . . . . KRIGLVLF
Query Conservation      

  

   
    
  
  
..... 

  

 

   
   

  

  

 

............
 
 
 
 
Alig confidence 
























.....





























............







Template Conservation            
 
    

 

  
 
   
             


      
                 
    
 

Template Sequence  FLAPRTQPELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAGYKAVLLGASLSTRFVPMLTTAAGTVKPASALVL
Template Known Secondary structure 


TTT
TT
GGG

SSGGGGGG

SS
SS

SS



Template Predicted Secondary structure 




































Template SS confidence 















































































   90.........100.........110.........120.........130.........140.........150.........160.........
 
   465....470.........
Predicted Secondary structure 



Query SS confidence 














Query Sequence  GKGNIGSRWLELFAR
Query Conservation 
 
 

      
  
Alig confidence 














Template Conservation 
 
 

  

     
Template Sequence  GVGVAGLQALATAKR
Template Known Secondary structure  S
S
Template Predicted Secondary structure 


Template SS confidence 














   170.........180....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions