Job Description P00562 Confidence 99.94% Date Thu Jan 5 10:56:45 GMT 2012 Rank 28 Aligned Residues 214 % Identity 25% Template c3nwyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:uridylate kinase; PDBTitle: structure and allosteric regulation of the uridine monophosphate2 kinase from mycobacterium tuberculosis Resolution 2.54 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.							.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.															.	.
Query SS confidence																				.	.	.	.	.	.															.	.
Query Sequence		Q	A	G	A	K	G	R	Q	L	H	K	F	G	G	S	S	L	A	.	.	.	.	.	.	D	V	K	C	Y	L	R	V	A	G	I	M	A	E	.	.	Y	S	Q	P	D	D	M	M	V	V	S	A	A	G	S	T	T	N	Q	L	I	N	W	L	K	L	S	Q	T	D	R	L	S	A	H	Q	V	Q	Q	T
Query Conservation																				.	.	.	.	.	.															.	.
Alig confidence																				.	.	.	.	.	.															.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	S	G	Y	S	R	V	L	L	K	L	G	G	E	M	F	G	G	G	Q	V	G	L	D	P	D	V	V	A	Q	V	A	R	Q	I	A	D	V	V	R	G	G	V	Q	I	A	V	V	I	G	G	G	N	F	F	R	G	A	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S	S		S								S	T	T	S	S	T	T	S	S	S																			T	T										T	T	T			S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	R	Y	Q	C	D	L	I	S	G	L	L	P	A	E	E	A	D	S	L	I	S	A	F	V	S	D	L	E	R	L	A	A	L	L	D	S	G	I	N	D	A	V	Y	A	E	V	V	G	H	G	E	V	W	S	A	R	L	M	S	A	V	L	N	Q	Q	G	L	P	A	A	W	L	D	A	R	E	F	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Q	L	G	M	E	R	T	R	S	D	Y	M	G	M	L	G	T	V	M	N	S	L	A	L	Q	D	F	L	E	K	E	G	I	V	T	R	V	Q	T	A	I	T	M	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	S																											T	T								S	S			.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Template SS confidence
																																					87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	E	R	A	A	Q	P	Q	V	D	E	G	L	S	Y	P	L	L	Q	Q	L	L	V	Q	H	P	G	K	R	L	V	V	T	G	F	I	S	R	N	N	A	G	E	T	V	L	L	G	R	N	G	S	D	Y	S	A	T	Q	I	G	A	L	A	G	V	S	R	V	T	I	W	S	D	V	A	G	V	Y	S
Query Conservation
Alig confidence		.	.	.	.	.	.	.																	.	.														.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																	.	.														.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	G	Q	V	A	E	P	Y	L	P	L	R	A	V	R	H	L	.	.	E	K	G	R	V	V	I	F	G	A	G	M	G	.	.	.	.	.	.	.	.	.	L	P	Y	F	S	T	D	T	T	A	A	Q	R	A	L	E	I	G	A	D	V	V	L	M	A	K	A	V	D	G	V	F	A
Template Known Secondary structure		.	.	.	.	.	.	.	T	T	T	S													.	.		T	T							S	T	T	S	.	.	.	.	.	.	.	.	.		T	T															T		S							S	S	S	S			S
Template Predicted Secondary structure		.	.	.	.	.	.	.																	.	.														.	.	.	.	.	.	.	.	.
Template SS confidence
									131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.										160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.										.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.
Query Sequence		A	D	P	R	K	V	K	D	A	C	L	L	P	L	L	R	L	D	E	A	S	E	L	A	R	L	A	A	P	V	L	H	A	R	T	L	Q	P	V	S	G	S	E	I	D	L	Q	L	R	C	S	Y	T	P	.	.	.	.	.	.	.	.	.	D	Q	G	S	T	R	I	E	R
Query Conservation																																																								.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.																.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.																.	.	.
Template Sequence		E	D	P	.	.	.	.	.	A	E	L	L	T	A	V	S	H	R	E	V	L	D	R	.	.	.	G	L	R	V	A	D	A	T	A	F	S	L	C	M	D	N	G	M	P	I	L	V	F	N	L	L	T	D	G	N	I	A	R	A	V	R	G	E	K	I	G	T	L	V	T	T
Template Known Secondary structure		S			.	.	.	.	.					S										T	.	.	.	T				S											T	T								S	S	S	T	T							T	T				S
Template Predicted Secondary structure					.	.	.	.	.																.	.	.
Template SS confidence
		193	.	.						.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions