Job Description P00562 Confidence 99.93% Date Thu Jan 5 10:56:45 GMT 2012 Rank 34 Aligned Residues 230 % Identity 11% Template c3l86A_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetylglutamate kinase; PDBTitle: the crystal structure of smu.665 from streptococcus mutans ua159 Resolution 2.06 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		K	G	R	Q	L	H	K	F	G	G	S	S	L	A	D	V	K	C	Y	L	R	V	A	G	I	M	A	E	.	.	Y	S	Q	P	D	D	M	M	V	V	S	A	A	G	S	T	T	N	Q	L	I	N	W	L	K	L	S	Q	T	D	R	L	S	A	H	Q	V	Q	Q	T	L	R	R	Y	Q	C	D	L	I	S
Query Conservation																														.	.
Alig confidence																	.	.												.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	I	I	V	I	K	I	G	G	V	A	S	Q	Q	.	.	L	S	G	D	F	L	S	Q	I	K	N	W	Q	D	A	G	K	Q	L	V	I	V	H	G	G	G	F	A	I	N	K	L	M	E	E	N	Q	V	P	V	K	K	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											T	T	G	G	G	S	.	.															T	T																				T	T							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		G	L	L	P	A	E	E	A	D	S	L	I	S	A	F	V	S	D	L	E	R	L	A	A	L	L	D	S	G	I	N	D	A	V	Y	A	E	V	V	G	H	G	E	V	W	S	A	R	L	M	S	A	V	L	N	Q	Q	G	L	P	A	A	W	L	D	A	R	E	F	.	L	R	A	E	R	A	A	Q	P	Q
Query Conservation																																																																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	R	V	T	S	K	D	D	M	V	L	V	S	H	A	L	L	D	L	V	G	K	N	L	Q	E	K	L	R	Q	A	G	V	S	C	Q	Q	L	K	S	D	I	K	H	V	V	A	A	D	Y	L	D	K	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				B															T	T											T	T							S	G	G	G	G	G	T						S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																											61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
								167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	V	D	E	G	L	S	Y	P	L	L	Q	Q	L	L	V	Q	H	P	G	K	R	L	V	V	T	G	F	I	S	R	N	N	A	G	E	T	V	L	L	G	R	N	G	S	D	Y	S	A	T	Q	I	G	A	L	A	G	V	S	R	V	T	I	W	S	D	V	A	G	V	Y	S	A	D	P
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.															.	.												.												.	.	.																													.	.	.	.
Template Conservation																						.	.												.												.	.	.																													.	.	.	.
Template Sequence		T	Y	G	Y	V	G	D	V	T	H	I	N	K	R	V	I	E	E	F	L	.	.	E	N	R	Q	I	P	I	L	A	S	L	.	G	Y	S	K	E	G	D	M	L	N	I	.	.	.	N	A	D	Y	L	A	T	A	V	A	V	A	L	A	A	D	K	L	I	L	M	T	N	V	K	G	V	L	.	.	.	.
Template Known Secondary structure				B	S	B																.	.		T	T							S		.				T	T	S						.	.	.													T	T		S							S	S	S	S			.	.	.	.
Template Predicted Secondary structure																						.	.												.												.	.	.																													.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.					.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																								.	.	.	.																					.
Query SS confidence																								.	.	.	.																					.
Query Sequence		R	K	V	K	D	A	C	L	L	P	L	L	R	L	D	E	A	S	E	L	A	R	.	.	.	.	L	A	A	P	V	L	H	A	R	T	L	Q	P	V	S	G	S	E	I	D	.	L	Q	L	R	C	S	Y	T	P	D	Q	G	S	T	R	I	E	R	V
Query Conservation																								.	.	.	.																					.
Alig confidence		.	.	.																				.	.	.	.																					.										.	.	.
Template Conservation		.	.	.																																																						.	.	.
Template Sequence		.	.	.	E	N	G	A	V	L	E	K	I	T	S	H	Q	V	Q	E	K	I	D	T	A	V	I	T	A	G	M	I	P	K	I	E	S	A	A	K	T	V	A	A	G	V	G	Q	V	L	I	G	D	N	L	L	T	.	.	.	G	T	L	I	T	A	D
Template Known Secondary structure		.	.	.		T	T								G	G	G	S						T	T	S	S		T	T														T	T		S						S	S	S	S		.	.	.	S
Template Predicted Secondary structure		.	.	.																																																						.	.	.
Template SS confidence
					186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.				.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions