Job Description P00562 Confidence 96.86% Date Thu Jan 5 10:56:45 GMT 2012 Rank 168 Aligned Residues 108 % Identity 12% Template c3ketA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:redox-sensing transcriptional repressor rex; PDBTitle: crystal structure of a rex-family transcriptional regulatory protein2 from streptococcus agalactiae bound to a palindromic operator Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		443	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	I	Q	G	L	H	Q	S	V	F	R	A	E	K	R	I	G	L	V	L	F	G	K	G	N	I	G	S	R	W	L	E	L	F	A	R	E	Q	S	T	L	S	A	R	T	G	F	E	F	V	L	A	G	V	V	D	S	R	R	S	L	L	S	Y	D	G	L	D	A	S	R	A	L	A	F	F	N	D	E
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Sequence		K	K	L	M	N	F	F	A	E	I	L	N	D	H	S	T	T	N	V	M	L	V	G	C	G	N	I	G	R	A	L	L	H	Y	R	F	H	D	.	.	.	.	.	.	.	.	R	N	K	M	Q	I	S	M	A	F	D	L	D	.	.	.	.	.	.	.	.	.	S	N	D	L	V	G	K	T	T	E	D	G
Template Known Secondary structure												T	T		S	S										S								T	S		G	G	G	.	.	.	.	.	.	.	.	T	S	S										T	.	.	.	.	.	.	.	.	.	T	S	T	T	T	T	S	B		T	T	S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.									.	.	.	110	.	.	.	.	.	.	.	.	.										120	.	.	.	.	.	.	.	.	.	130	.
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	E	Q	D	E	E	S	L	F	L	W	M	R	A	H	P	Y	D	D	L	V	V	L	D	V	T	A	S	Q	Q	L	A	D	Q	Y	L	D	F	A	S	H	G	F	H	V	I
Query Conservation
Alig confidence																					.	.
Template Conservation																					.	.
Template Sequence		I	P	V	Y	G	I	S	T	I	N	D	H	L	I	D	S	D	I	E	.	.	T	A	I	L	T	V	P	S	T	E	A	Q	E	V	A	D	I	L	V	K	A	G	I	K	G	I
Template Known Secondary structure			B				G	G	G					T	S	S	S				.	.						S		G	G	G											T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions