Job Description P00562 Confidence 98.16% Date Thu Jan 5 10:56:45 GMT 2012 Rank 119 Aligned Residues 154 % Identity 14% Template c3ip3D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:oxidoreductase, putative; PDBTitle: structure of putative oxidoreductase (tm_0425) from2 thermotoga maritima Resolution 2.14 Å

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		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.		.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure																																																																					.
Query SS confidence																																																																					.
Query Sequence		R	I	G	L	V	L	F	G	K	G	N	I	G	S	R	W	L	E	L	F	A	R	E	Q	S	T	L	S	A	R	T	G	F	E	F	V	L	A	G	V	V	D	S	R	R	S	L	L	S	Y	D	G	L	D	A	S	R	A	L	A	F	F	N	D	E	A	V	.	E	Q	D	E	E	S	L	F	L	W	M	R
Query Conservation																																																																					.
Alig confidence																									.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.															.
Template Conservation																									.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	K	I	C	V	I	G	S	S	G	H	F	R	Y	A	L	E	G	L	D	E	E	.	.	.	.	.	.	.	C	S	I	T	G	I	A	P	G	V	P	E	E	.	.	.	.	.	.	.	.	.	.	D	L	S	K	L	E	K	A	I	S	E	X	N	I	K	P	K	K	Y	N	N	W	W	E	X	L	E
Template Known Secondary structure										S	S	S		T					T	T			T	T	.	.	.	.	.	.	.									S	S	T	T		.	.	.	.	.	.	.	.	.	.											T	T	T							S
Template Predicted Secondary structure																									.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.								.	.	.	.	.	.	30	.	.	.	.	.	.											.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.		.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		A	H	P	Y	D	D	L	V	V	L	D	V	T	A	S	Q	Q	L	A	D	Q	Y	L	D	F	A	S	H	G	F	H	V	I	S	A	N	K	L	A	G	A	S	D	S	N	K	Y	R	Q	I	H	D	A	F	E	K	T	G	R	H	.	W	L	Y	N	A	T	V	G	A	G	L	P	I	N	H	T	V	R	D
Query Conservation																																																														.
Alig confidence							.	.																												.	.																									.
Template Conservation							.	.																												.	.
Template Sequence		K	E	K	P	D	.	.	I	L	V	I	N	T	V	F	S	L	N	G	K	I	L	L	E	A	L	E	R	K	I	H	A	F	V	.	.	E	K	P	I	A	T	T	F	E	D	L	E	K	I	R	S	V	Y	Q	K	V	R	N	E	V	F	F	T	A	X	F	G	I	R	Y	R	P	H	F	L	T	A	K	K
Template Known Secondary structure						S	.	.						S	S														T	T						.	.		S	S	S		S	S															T	T	T								G	G	G	G	S
Template Predicted Secondary structure							.	.																												.	.
Template SS confidence
		64	.	.	.	.			.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		616	.	.	.	620	.			.	.	.	.	.	.	.	.	630	.	.
Predicted Secondary structure								.	.
Query SS confidence								.	.
Query Sequence		L	I	D	S	G	D	.	.	T	I	L	S	I	S	G	I	F	S	G
Query Conservation								.	.
Alig confidence								.	.
Template Conservation
Template Sequence		L	V	S	E	G	A	V	G	E	I	R	L	V	N	T	Q	K	S	Y
Template Known Secondary structure					T	T	T	T		S										B
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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