Job Description P00562 Confidence 83.82% Date Thu Jan 5 10:56:45 GMT 2012 Rank 294 Aligned Residues 112 % Identity 13% Template c3dzbA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 thermophilus Resolution 2.46 Å

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		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	V	L	F	G	K	G	N	I	G	S	R	W	L	E	L	F	A	R	E	Q	S	T	L	S	A	R	T	G	F	E	F	V	L	A	G	V	V	D	S	R	R	S	L	L	S	Y	D	G	L	D	A	S	R	A	L	A	F	F	N	D	E	A	V	E	Q	D	E	E	S	L	F	L	W	M	R	A	H	P
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	I	Y	I	A	G	L	G	L	I	G	G	S	L	A	L	G	I	K	R	D	.	.	.	.	.	.	.	.	H	P	D	Y	E	I	L	G	Y	N	.	.	.	.	.	.	.	.	.	.	.	R	S	D	Y	S	R	N	I	A	L	E	R	G	I	V	D	R	A	T	G	D	F	K	E	F	A	P	L	A	D
Template Known Secondary structure						S			S												T	T	.	.	.	.	.	.	.	.		T	T	S							.	.	.	.	.	.	.	.	.	.	.	S											T		S		S				S						G	G	G		S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.									.	.	.	.	30	.	.	.	.	.												.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.				.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		Y	D	D	L	V	V	L	D	V	T	A	S	Q	Q	L	A	D	Q	Y	L	D	F	A	S	H	.	.	.	G	F	H	V	I	S	A	N	K	L	A	G	A	S	D	S	N	K	Y	R	Q	I	H	D	A	F	E	K	T	G	R	H	W
Query Conservation																											.	.	.
Alig confidence		.	.	.	.																						.	.	.										.	.	.
Template Conservation		.	.	.	.																																		.	.	.
Template Sequence		.	.	.	.	V	I	I	L	A	V	P	I	K	Q	T	X	A	Y	L	K	E	L	A	D	L	D	L	K	D	N	V	I	I	T	D	A	G	.	.	.	S	T	K	R	E	I	V	E	A	A	E	R	Y	L	T	G	K	N	V	Q	F
Template Known Secondary structure		.	.	.	.						S													T	T	S				T	T								.	.	.	S														T	T	S	S
Template Predicted Secondary structure		.	.	.	.																																		.	.	.
Template SS confidence
						66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions