Job Description P00562 Confidence 98.50% Date Thu Jan 5 10:56:45 GMT 2012 Rank 101 Aligned Residues 154 % Identity 21% Template c3dtyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase, gfo/idh/moca family; PDBTitle: crystal structure of an oxidoreductase from pseudomonas2 syringae Resolution 2.04 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		456	.	.	.	460	.	.	.	.	.	.	.				.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.		.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.						.
Predicted Secondary structure														.	.	.																														.																														.	.	.	.	.
Query SS confidence														.	.	.																														.																														.	.	.	.	.
Query Sequence		E	K	R	I	G	L	V	L	F	G	K	G	.	.	.	N	I	G	S	R	W	L	E	L	F	A	R	E	Q	S	T	L	S	A	R	T	G	F	E	F	V	L	A	G	.	V	V	D	S	R	R	S	L	L	S	Y	D	G	L	D	A	S	R	A	L	A	F	F	N	D	E	A	V	E	.	.	.	.	.	Q
Query Conservation														.	.	.																														.																														.	.	.	.	.
Alig confidence														.	.	.														.	.	.	.	.	.	.	.	.								.					.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Sequence		P	Q	P	I	R	W	A	X	V	G	G	G	S	Q	S	Q	I	G	Y	I	H	R	C	A	A	L	R	D	.	.	.	.	.	.	.	.	.	N	T	F	V	L	V	A	G	A	F	D	I	.	.	.	.	.	.	.	.	.	.	D	P	I	R	G	S	A	F	G	E	Q	L	G	V	D	S	E	R	C	Y	A
Template Known Secondary structure			S											T	T		S	S										G	G	.	.	.	.	.	.	.	.	.	G	S										S	.	.	.	.	.	.	.	.	.	.	S											T	T			G	G	G	B		S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.										.	.	.	40	.	.	.	.	.	.	.	.											.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	E	S	L	F	L	W	M	R	A	H	P	Y	D	D	L	V	V	L	D	V	T	A	S	Q	Q	L	A	D	Q	Y	L	D	F	A	S	H	G	F	H	V	I	S	A	N	K	L	A	G	A	S	D	S	N	K	Y	R	Q	I	H	D	A	F	E	K	T	G	R	H	W	L	Y	N	A	T	V	G	A	G
Query Conservation
Alig confidence																																													.	.																												.
Template Conservation																																													.	.																												.
Template Sequence		D	Y	L	S	X	F	E	Q	E	A	R	R	A	D	G	I	Q	A	V	S	I	A	T	P	N	G	T	H	Y	S	I	T	K	A	A	L	E	A	G	L	H	V	V	.	.	C	E	K	P	L	C	F	T	V	E	Q	A	E	N	L	R	E	L	S	H	K	H	N	R	I	V	G	.	V	T	Y	G	Y	A	G
Template Known Secondary structure		S									T	T		T	T			S						S		G	G	G											T	T					.	.			S		S		S															T	T					.				G	G	G	G
Template Predicted Secondary structure																																													.	.																												.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.
		607	.	.	610	.	.	.	.	.	.	.	.	.	620	.			.	.	.	.	.	.	.	.	630	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		L	P	I	N	H	T	V	R	D	L	I	D	S	G	D	.	.	T	I	L	S	I	S	G	I	F	S
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		H	Q	L	I	E	Q	A	R	E	X	I	A	A	G	E	L	G	D	V	R	X	V	H	X	Q	F	A
Template Known Secondary structure		S												T	T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions