Job Description P00562 Confidence 70.05% Date Thu Jan 5 10:56:45 GMT 2012 Rank 399 Aligned Residues 123 % Identity 11% Template c3donA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from staphylococcus2 epidermidis Resolution 2.10 Å

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		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.						.	.	510	.
Predicted Secondary structure																																																																									.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.
Query Sequence		R	T	G	P	T	E	S	L	I	Q	G	L	H	Q	S	V	F	R	A	E	K	R	I	G	L	V	L	F	G	K	G	N	I	G	S	R	W	L	E	L	F	A	R	E	Q	S	T	L	S	A	R	T	G	F	E	F	V	L	A	G	V	V	D	S	R	R	S	L	L	S	Y	.	.	.	.	.	D	G	L	D
Query Conservation																																																																									.	.	.	.	.
Alig confidence																								.																			.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation																								.																			.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	N	T	D	G	I	G	Y	V	N	G	L	K	Q	I	Y	E	G	I	E	D	A	.	Y	I	L	I	L	G	A	G	G	A	S	K	G	I	A	N	E	L	.	.	.	.	.	.	.	.	.	.	Y	K	I	V	R	P	T	L	T	V	A	N	R	T	M	S	R	F	N	N	W	S	L	N	I	N	K	I	N
Template Known Secondary structure																	S	T	T	G	G	G		.								S											.	.	.	.	.	.	.	.	.	.		T	T			S							S		G	G	G	G	T	T			S
Template Predicted Secondary structure																								.																			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.											.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		512	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	R	A	L	A	F	F	N	D	E	A	V	E	Q	D	E	E	S	L	F	L	W	M	R	A	H	P	Y	D	D	L	V	V	L	D	V	T	A	S	Q	Q	L	A	D	Q	Y	L	D	F	A	S	H	G	F	H	V	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	S	H	A	E	S	H	L	D	E	F	D	I	I	I	N	T	T	P	D	S	V	I	S	L	N	R	L	A	S	H	T	L	V	S	D	I	V	Y	N	P	Y	K	T	P	I	L	I	E	A	E	Q	R	G	N	P	I	Y	N
Template Known Secondary structure								T	G	G	G		S										S	S			T	T			S	S						S			S	S	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions