Job Description P00562 Confidence 100.00% Date Thu Jan 5 10:56:45 GMT 2012 Rank 8 Aligned Residues 319 % Identity 26% Template c3do5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: crystal structure of putative homoserine dehydrogenase (np_069768.1)2 from archaeoglobus fulgidus at 2.20 a resolution Resolution 2.20 Å

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		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	G	L	V	L	F	G	K	G	N	I	G	S	R	W	L	E	L	F	A	R	E	Q	S	T	L	S	A	R	T	G	F	E	F	V	L	A	G	V	V	D	S	R	R	S	L	L	S	Y	D	G	L	D	A	S	R	A	L	A	F	F	N	D	E	A	V	E	Q	D	E	E	S	L	F	L	W	M	R	A
Query Conservation
Alig confidence																																		.																		.	.
Template Conservation																																		.																		.	.
Template Sequence		X	I	K	I	A	I	V	G	F	G	T	V	G	Q	G	V	A	E	L	L	I	R	K	R	E	E	I	E	K	A	I	G	.	E	F	K	V	T	A	V	A	D	S	K	S	S	I	S	G	D	.	.	F	S	L	V	E	A	L	R	X	K	R	E	T	G	X	L	R	D	D	A	K	A	I	E	V	V	R	S
Template Known Secondary structure											S													T										.										S	S					S	S	.	.														S	S		S	B
Template Predicted Secondary structure																																		.																		.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.			50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	P	Y	D	D	L	V	V	L	D	V	T	A	S	Q	Q	L	A	D	Q	Y	L	D	F	A	S	H	G	F	H	V	I	S	A	N	K	L	A	G	A	S	D	S	N	K	Y	R	Q	I	H	D	A	F	E	K	T	G	R	H	W	L	Y	N	A	T	V	G	A	G	L	P	I	N	H	T	V	R	D	L	I
Query Conservation
Alig confidence						.	.																																			.	.	.
Template Conservation						.	.																																			.	.	.
Template Sequence		A	D	Y	D	.	.	V	L	I	E	A	S	V	T	R	E	G	V	N	Y	I	R	E	A	L	K	R	G	K	H	V	V	T	S	N	K	G	P	L	V	.	.	.	A	E	F	H	G	L	X	S	L	A	E	R	N	G	V	R	L	X	Y	E	A	T	V	G	G	A	X	P	V	V	K	L	A	K	R	Y	L
Template Known Secondary structure		S			S	.	.																				T	T	T								S					.	.	.													T	T						G	G	G	S	S	T	T	S								T	T	T
Template Predicted Secondary structure						.	.																																			.	.	.
Template SS confidence
		78	.	80	.			.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.		.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		D	S	G	D	T	I	L	S	I	S	G	I	F	S	G	T	L	S	W	L	F	L	Q	F	.	D	G	S	V	P	F	T	E	L	V	D	Q	A	W	Q	Q	G	L	T	E	P	D	P	R	D	D	L	S	G	K	D	V	M	R	K	L	V	I	L	A	R	E	A	G	Y	N	I	E	P	D	Q	V	R	V	E
Query Conservation																										.
Alig confidence		.																								.
Template Conservation		.
Template Sequence		.	A	L	C	E	I	E	S	V	K	G	I	F	N	G	T	C	N	Y	I	L	S	R	X	E	E	E	R	L	P	Y	E	H	I	L	K	E	A	Q	E	L	G	Y	A	E	A	D	P	S	Y	D	V	E	G	I	D	A	A	L	K	L	V	I	I	A	N	T	I	G	V	K	A	S	Y	E	D	V	E	V	T
Template Known Secondary structure		.	T	T	S																																					T	T	S	S		S	S						T	S														T	T					G	G	G	S
Template Predicted Secondary structure		.
Template SS confidence
			157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		697	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	V	P	A	H	C	E	G	G	S	I	D	H	F	F	E	N	G	D	E	L	N	E	Q	M	V	Q	R	L	E	A	A	R	E	M	G	L	V	L	R	Y	V	A	R	F	D	A	N	G	K	A	R	V	G	V	E	A	V	R	E	D	H	P	L	A	S	L	L	P	C	D	N	V	F	A	I	E	S	R
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																	.
Template Sequence		G	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	I	T	P	E	A	F	Q	V	A	A	E	K	G	Y	T	I	R	L	I	A	E	V	S	R	E	.	K	L	K	V	S	P	R	L	V	P	F	H	H	P	L	A	.	I	K	G	T	X	N	A	A	X	F	K	T	D
Template Known Secondary structure			S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T											T	T	T										S	S	S	.											T	T	S	G	G	G	.			S	S									S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.																	.
Template SS confidence
		236	.	.																					.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280		.	.	.	.	.	.	.	.	.	290	.	.	.
		777	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	Y	R	D	N	P	L	V	I	R	G	P	G	A	G	R	D	V	T	A	G	A	I	Q	S	D	I	N	R	L	A	Q	L
Query Conservation
Alig confidence					.	.
Template Conservation					.	.
Template Sequence		T	A	G	.	.	S	I	F	V	A	G	R	G	A	G	K	E	E	T	A	S	A	I	L	S	D	L	Y	E	I	Y	A	G
Template Known Secondary structure		S	S		.	.
Template Predicted Secondary structure					.	.
Template SS confidence
		294	.	.			.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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