Job Description P00562 Confidence 98.37% Date Thu Jan 5 10:56:45 GMT 2012 Rank 109 Aligned Residues 131 % Identity 18% Template c3dapB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:diaminopimelic acid dehydrogenase; PDBTitle: c. glutamicum dap dehydrogenase in complex with nadp+ and2 the inhibitor 5s-isoxazoline Resolution 2.20 Å

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		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	I	G	L	V	L	F	G	K	G	N	I	G	S	R	W	L	E	L	F	A	R	E	Q	S	T	L	S	A	R	T	G	F	E	F	V	L	A	G	V	V	D	S	R	R	S	L	L	S	Y	D	G	L	D	A	S	R	A	L	A	F	F	N	D	E	A	V	E	Q	D	E	E	S	L	F	L	W	M	R
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.																							.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.																							.	.	.														.	.	.	.	.	.	.	.	.
Template Sequence		T	N	I	R	V	A	I	V	G	Y	G	N	L	G	R	S	V	E	K	L	I	A	K	Q	.	.	.	.	.	.	.	.	.	P	D	M	D	L	V	G	I	F	S	R	R	A	T	L	D	T	K	T	P	V	F	.	.	.	D	V	A	D	V	D	K	H	A	D	D	V	D	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												S											T	T		.	.	.	.	.	.	.	.	.	S	S									S		S			S	S	S	S				.	.	.		G	G	G	G	G	G	G	T	T	T		S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.																							.	.	.														.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.										.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.				.	.	50	.	.	.	.	.	.	.	.	.	60
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	H	P	Y	D	D	L	V	V	L	D	V	T	A	S	Q	Q	L	A	D	Q	Y	L	D	F	A	S	H	G	F	H	V	I	S	A	N	K	L	A	G	A	S	D	S	N	K	Y	R	Q	I	H	D	A	F	E	K	T	G	R	H	W	L	Y	N	A	T	V	G	A	G	L	P	I	N	H	T	V	R	D	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.																													.																													.	.	.
Template Conservation		.	.	.	.	.	.	.																													.																													.	.	.
Template Sequence		.	.	.	.	.	.	.	V	L	F	L	C	M	G	S	A	T	D	I	P	E	Q	A	P	K	F	A	Q	F	A	C	T	V	D	T	.	Y	D	N	H	R	D	I	P	R	H	R	Q	V	M	N	E	A	A	T	A	A	G	N	V	A	L	V	S	.	.	.	T	G	W	D	P	G	M	F	S	I	N	R	V
Template Known Secondary structure		.	.	.	.	.	.	.						S		T	T	T										T	T	T	S						.				G	G	G																T						S	.	.	.		S	B	T	T	B
Template Predicted Secondary structure		.	.	.	.	.	.	.																													.																													.	.	.
Template SS confidence
									61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.
		617	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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