Job Description P00562 Confidence 83.51% Date Thu Jan 5 10:56:45 GMT 2012 Rank 297 Aligned Residues 141 % Identity 13% Template c3ckyA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:2-hydroxymethyl glutarate dehydrogenase; PDBTitle: structural and kinetic properties of a beta-hydroxyacid dehydrogenase2 involved in nicotinate fermentation Resolution 2.30 Å

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		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510					.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
Predicted Secondary structure																																																							.	.	.	.
Query SS confidence																																																							.	.	.	.
Query Sequence		R	I	G	L	V	L	F	G	K	G	N	I	G	S	R	W	L	E	L	F	A	R	E	Q	S	T	L	S	A	R	T	G	F	E	F	V	L	A	G	V	V	D	S	R	R	S	L	L	S	Y	D	G	L	.	.	.	.	D	A	S	R	A	L	A	F	F	N	D	E	A	V	E	Q	D	E	E	S	L	F	L
Query Conservation																																																							.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.
Template Sequence		S	I	K	I	G	F	I	G	L	G	A	M	G	K	P	M	A	I	N	L	L	K	E	.	.	.	.	.	.	.	.	G	V	T	V	Y	A	F	D	L	M	E	A	N	V	A	A	V	V	A	Q	G	A	Q	A	C	E	N	N	Q	K	V	A	A	A	S	D	I	I	F	T	S	L	P	N	A	G	I	V	E
Template Known Secondary structure												T	T											T	.	.	.	.	.	.	.	.	T								S	S									T	T	T					S	S									S							S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.									.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		534	.	.	.	.	.	540	.								.	.	.	.	.	.	.	.	550	.	.	.	.	.			.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.														.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
Predicted Secondary structure										.	.	.	.	.	.	.															.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.															.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	M	R	A	H	P	Y	D	.	.	.	.	.	.	.	D	L	V	V	L	D	V	T	A	S	Q	Q	L	A	.	.	D	Q	Y	L	D	F	A	S	H	G	F	H	V	I	S	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	K	L	A	G	A	S	D	S	N	K	Y	R	Q	I	H	D	A	F	E
Query Conservation										.	.	.	.	.	.	.															.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.															.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	V	M	N	G	P	G	G	V	L	S	A	C	K	A	G	T	V	I	V	D	M	S	S	V	S	P	S	S	T	L	K	M	A	K	V	A	A	E	K	G	I	D	Y	V	D	A	P	V	S	G	G	T	K	G	A	E	A	G	T	L	T	I	M	V	G	A	S	E	A	V	F	E	K	I	Q	P	V	L	S
Template Known Secondary structure						S	T	T						S		T	T																								T	T										S								T								S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		592	.	.	.	.	.	.	.	600	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	G	R	H	W	L	Y	N	A	T	V	G	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	G	K	D	I	Y	H	V	G	D	T	G	A	G
Template Known Secondary structure												S	T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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