Job Description P00562 Confidence 69.48% Date Thu Jan 5 10:56:45 GMT 2012 Rank 407 Aligned Residues 117 % Identity 13% Template c3b1fA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative prephenate dehydrogenase; PDBTitle: crystal structure of prephenate dehydrogenase from streptococcus2 mutans Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	R	I	G	L	V	L	F	G	K	G	N	I	G	S	R	W	L	E	L	F	A	R	E	Q	S	T	L	S	A	R	T	G	F	E	F	V	L	A	G	V	V	D	S	R	R	S	L	L	S	Y	D	G	L	D	A	S	R	A	L	A	F	F	N	D	E	A	V	E	Q	D	E	E	S	L	F	L	W	M
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	E	E	K	T	I	Y	I	A	G	L	G	L	I	G	A	S	L	A	L	G	I	K	R	D	.	.	.	.	.	.	.	.	H	P	H	Y	K	I	V	G	Y	N	.	.	.	.	.	.	.	.	.	.	.	R	S	D	R	S	R	D	I	A	L	E	R	G	I	V	D	E	A	T	A	D	F	K	V	F	A
Template Known Secondary structure		G											S														.	.	.	.	.	.	.	.		T	T	S							.	.	.	.	.	.	.	.	.	.	.	S	S										T	T	S		S				S		T	T	T	T	G
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.									.	.	.	.	30	.	.	.	.	.												.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.				.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		R	A	H	P	Y	D	D	L	V	V	L	D	V	T	A	S	Q	Q	L	A	D	Q	Y	L	D	F	A	S	H	G	.	.	.	F	H	V	I	S	A	N	K	L	A	G	A	S	D	S	N	K	Y	R	Q	I	H	D	A	F	E	K	T	G	R	H	W	L
Query Conservation																																.	.	.
Alig confidence						.	.	.	.																							.	.	.									.	.	.
Template Conservation						.	.	.	.																																		.	.	.
Template Sequence		A	L	A	D	.	.	.	.	V	I	I	L	A	V	P	I	K	K	T	I	D	F	I	K	I	L	A	D	L	D	L	K	E	D	V	I	I	T	D	A	G	.	.	.	S	T	K	Y	E	I	V	R	A	A	E	Y	Y	L	K	D	K	P	V	Q	F	V
Template Known Secondary structure		G	G		S	.	.	.	.						S														T	S				T	T								.	.	.	S														T	T	S	S
Template Predicted Secondary structure						.	.	.	.																																		.	.	.
Template SS confidence
		62	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.				.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions