Job Description P00562 Confidence 98.00% Date Thu Jan 5 10:56:45 GMT 2012 Rank 125 Aligned Residues 149 % Identity 13% Template c2z2vA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical protein ph1688; PDBTitle: crystal structure of l-lysine dehydrogenase from2 hyperthermophilic archaeon pyrococcus horikoshii Resolution 2.44 Å

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		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.		.	.	.	.	530	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		R	I	G	L	V	L	F	G	K	G	N	I	G	S	R	W	L	E	L	F	A	R	E	Q	S	T	L	S	A	R	T	G	F	E	F	V	L	A	G	V	V	D	S	R	R	S	L	L	S	Y	D	G	L	D	A	S	R	A	L	A	F	F	N	D	E	A	V	E	.	Q	D	E	E	S	L	F	L	W	M	R
Query Conservation																																																																						.
Alig confidence																								.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.																.
Template Conservation																								.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Sequence		H	M	K	V	L	I	L	G	A	G	N	I	G	R	A	I	A	W	D	L	K	D	.	.	.	.	.	.	.	.	.	E	F	D	V	Y	I	G	D	V	N	N	E	.	.	.	.	.	.	.	.	.	.	N	L	E	K	V	K	E	F	A	T	P	L	K	V	D	A	S	N	F	D	K	L	V	E	V	M	K
Template Known Secondary structure											S											T	T	.	.	.	.	.	.	.	.	.	T	S							S				.	.	.	.	.	.	.	.	.	.						T	T	T	S							T	T										T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.										.	.	.	.	.	.	.	.	30	.	.	.											.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.			.	610	.	.	.	.
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		A	H	P	Y	D	D	L	V	V	L	D	V	T	A	S	Q	Q	L	A	D	Q	Y	L	D	F	A	S	H	G	F	H	V	I	S	A	N	K	L	A	G	A	S	D	S	N	K	Y	R	Q	I	H	D	A	F	E	K	T	G	R	H	W	L	Y	N	A	T	V	G	A	G	L	P	.	.	I	N	H	T	V	R
Query Conservation																																																																										.	.
Alig confidence					.	.	.	.																																					.	.	.	.	.																									.	.
Template Conservation					.	.	.	.																																					.	.	.	.	.
Template Sequence		E	F	E	.	.	.	.	L	V	I	G	A	L	P	G	F	L	G	F	K	S	I	K	A	A	I	K	S	K	V	D	M	V	D	V	S	F	M	P	E	N	P	L	.	.	.	.	.	E	L	R	D	E	A	E	K	A	Q	V	T	I	V	F	D	A	G	F	A	P	G	L	S	N	I	L	M	G	R	I	F
Template Known Secondary structure		T		S	.	.	.	.																					T	T										S	S		G	G	.	.	.	.	.	G	G							T	T						S		B	T	T	T	B
Template Predicted Secondary structure					.	.	.	.																																					.	.	.	.	.
Template SS confidence
		61	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	I	D	S	G	D	T	I	L	S	I	S	G	I	F	S	G	T	L	S
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		Q	E	L	D	L	.	K	E	G	Y	I	Y	V	G	G	L	P	K	D	P	K
Template Known Secondary structure				S			.												S	S
Template Predicted Secondary structure							.
Template SS confidence
		132	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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