Job Description P00562 Confidence 85.79% Date Thu Jan 5 10:56:45 GMT 2012 Rank 283 Aligned Residues 118 % Identity 14% Template c2yv1A_ PDB info PDB header:ligase Chain: A: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: crystal structure of succinyl-coa synthetase alpha chain from2 methanocaldococcus jannaschii dsm 2661 Resolution 1.70 Å

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		452	.	.	.	.	.	.	.	460	.	.	.	.	.	.		.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure																	.
Query SS confidence																	.
Query Sequence		V	F	R	A	E	K	R	I	G	L	V	L	F	G	K	.	G	N	I	G	S	R	W	L	E	L	F	A	R	E	Q	S	T	L	S	A	R	T	G	F	E	F	V	L	A	G	V	V	D	S	R	R	S	L	L	S	Y	D	G	L	D	A	S	R	A	L	A	F	F	N	D	E	A	V	E	Q	D	E	E	S
Query Conservation																	.
Alig confidence																	.														.	.	.	.	.	.	.	.					.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.					.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	I	L	L	D	E	N	T	K	A	I	V	Q	G	I	T	G	R	Q	G	S	F	H	T	K	K	M	L	E	.	.	.	.	.	.	.	.	C	G	T	K	.	.	I	V	G	G	V	T	P	G	K	G	G	Q	N	V	H	G	V	.	.	.	.	.	.	.	.	.	.	.	.	P	V	F	D	T	V	K	E
Template Known Secondary structure				S	S		T	T							T	T	T	S													.	.	.	.	.	.	.	.	T	T			.	.							T	T		T	T				T	T		.	.	.	.	.	.	.	.	.	.	.	.				S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.					.	.																		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.									.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.													.	.	.	60	.	.	.	.
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	L	W	M	R	A	H	P	Y	D	D	L	V	V	L	D	V	T	A	S	Q	Q	L	A	D	Q	Y	L	D	F	A	S	H	G	F	H	V	I	S	A	N	K	L	A	G	A	S	D	S	N	K	Y	R	Q	I	H	D	A	F	E	K	T	G	R	H	W	L
Query Conservation
Alig confidence						.	.	.	.	.																																								.	.
Template Conservation						.	.	.	.	.																																								.	.
Template Sequence		A	V	K	E	.	.	.	.	.	T	D	A	N	A	S	V	I	F	V	P	A	P	F	A	K	D	A	V	F	E	A	I	D	A	G	I	E	L	I	V	V	I	T	E	H	I	P	V	.	.	H	D	T	M	E	F	V	N	Y	A	E	D	V	G	V	K	I	I
Template Known Secondary structure						.	.	.	.	.																									T	T		S							S					.	.														T
Template Predicted Secondary structure						.	.	.	.	.																																								.	.
Template SS confidence
		65	.	.	.						.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions