Job Description P00562 Confidence 99.95% Date Thu Jan 5 10:56:45 GMT 2012 Rank 24 Aligned Residues 238 % Identity 14% Template c2rd5A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:acetylglutamate kinase-like protein; PDBTitle: structural basis for the regulation of n-acetylglutamate kinase by pii2 in arabidopsis thaliana Resolution 2.51 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		G	R	Q	L	H	K	F	G	G	S	S	L	A	D	V	K	C	Y	L	R	V	A	G	I	M	A	E	.	.	Y	S	Q	P	D	D	M	M	V	V	S	A	A	G	S	T	T	N	Q	L	I	N	W	L	K	L	S	Q	T	D	R	L	S	A	H	Q	V	Q	Q	T	L	R	R	Y	Q	C	D	L	I	S	G
Query Conservation																													.	.
Alig confidence																													.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	I	V	V	K	Y	G	G	A	A	M	T	S	P	E	L	K	S	S	V	V	S	D	L	V	L	L	A	C	V	G	L	R	P	I	L	V	H	G	G	G	P	D	I	N	R	Y	L	K	Q	L	N	I	P	A	E	F	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T																						T	T																				T	T							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		L	L	P	A	E	E	A	D	S	L	I	S	A	F	V	S	D	L	E	R	L	A	A	L	L	D	S	G	I	N	D	A	V	Y	A	E	V	V	G	H	G	E	V	W	S	A	R	L	M	S	A	V	L	N	Q	Q	G	L	P	A	A	W	L	D	A	R	E	F	.	L	R	A	E	R	A	A	Q	P	Q	V
Query Conservation																																																																						.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																													.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	R	V	T	D	A	T	T	M	E	I	V	S	M	V	L	V	G	K	V	N	K	N	L	V	S	L	I	N	A	A	G	A	T	A	V	G	L	S	G	H	D	G	R	L	L	T	A	R	P	V	P	N	S	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				B															T												T	T	S							T	T	G	G	G								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																										96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		168	.	170	.	.								.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure							.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.
Query Sequence		D	E	G	L	S	.	.	.	.	.	.	.	Y	P	L	L	Q	Q	L	L	V	Q	H	P	G	K	R	L	V	V	T	G	F	I	S	R	N	N	A	G	E	T	V	L	L	G	R	N	G	S	D	Y	S	A	T	Q	I	G	A	L	A	G	V	S	R	V	T	I	W	S	D	V	A	G	V	Y	S	A	D	P
Query Conservation							.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.									.	.											.													.	.	.
Template Conservation																						.	.											.													.	.	.
Template Sequence		Q	L	G	F	V	G	E	V	A	R	V	D	P	S	V	L	R	P	L	V	.	.	D	Y	G	Y	I	P	V	I	A	S	.	V	A	A	D	D	S	G	Q	A	Y	N	I	.	.	.	N	A	D	T	V	A	G	E	L	A	A	A	L	G	A	E	K	L	I	L	L	T	D	V	A	G	I	L	E	N	K	E
Template Known Secondary structure				B	S									G	G	G						.	.		T	T							S	.					T	T	S						.	.	.														T		S							S	S	S	S			S	S	S	S
Template Predicted Secondary structure																						.	.											.													.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.					.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.	.	290	.											.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure																									.	.	.	.																				.										.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.																				.										.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	V	K	D	A	C	L	L	P	L	L	R	L	D	E	A	S	E	L	A	R	L	.	.	.	.	A	A	P	V	L	H	A	R	T	L	Q	P	V	S	G	S	E	I	D	.	L	Q	L	R	C	S	Y	T	P	.	.	.	.	.	.	.	.	.	.	D	Q	G	S	T	R	I	E	R	V
Query Conservation																									.	.	.	.																				.										.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.																				.	.	.	.																				.										.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.
Template Sequence		D	.	.	.	P	S	S	L	I	K	E	I	D	I	K	G	V	K	K	M	I	E	D	G	K	V	A	G	G	M	I	P	K	V	K	C	C	I	R	S	L	A	Q	G	V	K	T	A	S	I	I	D	G	R	R	Q	H	S	L	L	H	E	I	M	S	D	E	G	A	G	T	M	I	T	G	R
Template Known Secondary structure			.	.	.	T	T	S																T	T	S	S		T	T														T	T		S							T	T	S	T	T								S	S	S		S
Template Predicted Secondary structure			.	.	.
Template SS confidence
		226				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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