Job Description P00562 Confidence 99.57% Date Thu Jan 5 10:56:45 GMT 2012 Rank 54 Aligned Residues 226 % Identity 18% Template c2r98A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative acetylglutamate synthase; PDBTitle: crystal structure of n-acetylglutamate synthase (selenomet2 substituted) from neisseria gonorrhoeae Resolution 2.40 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		A	K	G	R	Q	L	H	K	F	G	G	S	S	L	A	D	V	K	C	Y	L	R	V	A	G	I	M	A	E	.	.	Y	S	Q	P	D	D	M	M	V	V	S	A	A	G	S	T	T	N	Q	L	I	N	W	L	K	L	S	Q	T	D	R	L	S	A	H	Q	V	Q	Q	T	L	R	R	Y	Q	C	D	L	I
Query Conservation																															.	.
Alig confidence																				.											.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	T	T	L	V	A	G	I	D	G	R	L	L	E	G	G	T	.	L	N	K	L	A	A	D	I	G	L	L	S	Q	L	G	I	R	L	V	L	I	H	G	A	Y	H	F	L	D	R	L	A	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T									G	G	G	S	S	S	S		.														T	T																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.										.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150				.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.																																	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.																																	.	.	.
Query Sequence		S	G	L	L	P	A	E	E	A	D	S	L	I	S	A	F	V	S	D	L	E	R	L	A	A	L	L	D	S	G	I	N	.	.	.	.	.	.	.	.	.	D	A	V	Y	A	E	V	V	G	H	G	E	V	W	S	A	R	L	M	S	A	V	L	N	Q	Q	G	L	P	A	A	W	.	.	.	L	D	A	R
Query Conservation																																		.	.	.	.	.	.	.	.	.																																	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.																						.											.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	R	T	P	H	Y	C	R	G	L	R	V	T	D	E	T	S	L	G	Q	A	Q	Q	F	A	G	T	V	R	S	R	F	E	A	A	.	L	C	G	S	S	V	P	L	V	S	G	N	F	L	T	A	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S							T	T				B																							.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																					.
Template SS confidence
																												74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		155	.		.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure				.					.
Query SS confidence				.					.
Query Sequence		E	F	.	L	R	A	E	.	R	A	A	Q	P	Q	V	D	E	G	L	S	Y	P	L	L	Q	Q	L	L	V	Q	H	P	G	K	R	L	V	V	T	G	F	I	S	R	N	N	A	G	E	T	V	L	L	G	R	N	G	S	D	Y	S	A	T	Q	I	G	A	L	A	G	V	S	R	V	T	I	W	S	D	V
Query Conservation				.					.
Alig confidence				.					.																					.	.												.												.	.	.
Template Conservation																														.	.												.												.	.	.
Template Sequence		P	I	G	V	I	D	G	T	D	X	E	Y	A	G	V	I	R	K	T	D	T	A	A	L	R	F	Q	L	.	.	D	A	G	N	I	V	W	X	P	P	L	.	G	H	S	Y	G	G	K	T	F	N	L	.	.	.	D	X	V	Q	A	A	A	S	V	A	V	S	L	Q	A	E	K	L	V	Y	L	T	L	S
Template Known Secondary structure							T	T				B	T	B																.	.		T	T							S		.				T	T	S						.	.	.													T	T		S							S	S
Template Predicted Secondary structure																														.	.												.												.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.		.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.		.	.	.	.	.	.											.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.												.							.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.												.							.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	V	Y	S	A	D	P	R	K	V	K	D	A	C	L	L	P	L	L	R	L	D	E	A	S	E	L	A	R	L	A	A	P	V	L	H	A	R	.	.	T	L	Q	P	V	S	G	S	E	I	D	.	L	Q	L	R	C	S	.	.	.	.	.	.	.	.	.	.	Y	T	P	D	Q	G	S	T	R	I	E
Query Conservation																																									.	.												.							.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.																													.	.												.							.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.
Template Sequence		D	G	I	S	R	.	.	.	.	.	.	P	D	G	T	L	A	E	T	L	S	A	Q	E	A	Q	S	L	A	E	H	A	A	S	E	T	R	R	L	I	S	S	A	V	A	A	L	E	G	G	V	H	R	V	Q	I	L	N	G	A	A	D	G	S	L	L	Q	E	L	F	T	R	N	G	I	G	T	S	I	A
Template Known Secondary structure		S	S		B		.	.	.	.	.	.	T	T	S		B		S												T	T	S																	T	T		S							T	T	S	T	T								S	S	S		S	S
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		209	210	.	.	.							.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		283	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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