Return to main results Retrieve Phyre Job Id

Job DescriptionP00562
Confidence97.04%DateThu Jan 5 10:56:45 GMT 2012
Rank161Aligned Residues96
% Identity17%Templatec2pkrI_
PDB info PDB header:oxidoreductaseChain: I: PDB Molecule:glyceraldehyde-3-phosphate dehydrogenase aor; PDBTitle: crystal structure of (a+cte)4 chimeric form of2 photosyntetic glyceraldehyde-3-phosphate dehydrogenase,3 complexed with nadp
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   458.460.........470.........480.........490.........500.........510.........520.........530.......
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  RIGLVLFGKGNIGSRWLELFAREQSTLSARTGFEFVLAGVVDSRRSLLSYDGLDASRALAFFNDEAVEQDEESLFLWMRA
Query Conservation   
 
 
 
 
 

      
      
    
  
 
  
  
   
    

                           
Alig confidence 






















.......













.........


























Template Conservation 













 


 
   .......     






  .........     



  

  
     
     
Template Sequence  KLKVAINGFGRIGRNFLRCWHGR. . . . . . . KDSPLDVVVINDTG. . . . . . . . . GVKQASHLLKYDSILGTFDADVKTAGD
Template Known Secondary structure 


ST
.......SS
S
TT.........


TTT
S
SS

TT
Template Predicted Secondary structure 




.......






.........














Template SS confidence 















































































   0.........10.........20.. .......30...... ...40.........50.........60...
 
   538.540. ........550.........560.........
Predicted Secondary structure 



.......................









Query SS confidence 



. . . . . . . . . . . . . . . . . . . . . . .



























Query Sequence  HPYD. . . . . . . . . . . . . . . . . . . . . . . DLVVLDVTASQQLADQYLDFASHGFHVI
Query Conservation      .......................  



 
           

  
 


Alig confidence 



.......................



























Template Conservation    
 
 
  
 
    

  
 
   






 

     
 
  

  




Template Sequence  SAISVDGKVIKVVSDRNPVNLPWGDMGIDLVIEGTGVFVDRDGAGKHLQAGAKKV
Template Known Secondary structure  STT

S
GGGS
T


SSS

BTTT
S
Template Predicted Secondary structure 























Template SS confidence 






















































   62.......70.........80.........90.........100.........110......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions