Job Description P00562 Confidence 77.28% Date Thu Jan 5 10:56:45 GMT 2012 Rank 345 Aligned Residues 116 % Identity 15% Template c2nu8D_ PDB info PDB header:ligase Chain: D: PDB Molecule:succinyl-coa ligase [adp-forming] subunit alpha; PDBTitle: c123at mutant of e. coli succinyl-coa synthetase Resolution 2.15 Å

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		453	.	.	.	.	.	.	460	.	.	.	.	.	.		.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		F	R	A	E	K	R	I	G	L	V	L	F	G	K	.	G	N	I	G	S	R	W	L	E	L	F	A	R	E	Q	S	T	L	S	A	R	T	G	F	E	F	V	L	A	G	V	V	D	S	R	R	S	L	L	S	Y	D	G	L	D	A	S	R	A	L	A	F	F	N	D	E	A	V	E	Q	D	E	E	S	L
Query Conservation																.
Alig confidence																.														.	.	.	.	.	.	.	.						.					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.						.					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	I	D	K	N	T	K	V	I	C	Q	G	F	T	G	S	Q	G	T	F	H	S	E	Q	A	I	A	.	.	.	.	.	.	.	.	Y	G	T	K	M	.	V	G	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	G	K	G	G	T	T	H	L	G	L	P	V	F	N	T	V	R	E	A
Template Known Secondary structure			S			T	T							T	T	T	S													.	.	.	.	.	.	.	.		T				.					.	.	.	.	.	.	.	.	.	.	.	.	.		T	T		T	T				T	T					S	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.						.					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.									30	.	.	.	.		.	.	.	.														.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.		.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		F	L	W	M	R	A	H	P	Y	D	D	L	V	V	L	D	V	T	A	S	Q	Q	L	A	D	Q	Y	L	D	F	A	S	H	G	.	F	H	V	I	S	A	N	K	L	A	G	A	S	D	S	N	K	Y	R	Q	I	H	D	A	F	E	K	T	G	R	H	W	L
Query Conservation																																				.
Alig confidence					.	.	.	.	.																											.									.	.	.
Template Conservation					.	.	.	.	.																																				.	.	.
Template Sequence		V	A	A	.	.	.	.	.	T	G	A	T	A	S	V	I	Y	V	P	A	P	F	C	K	D	S	I	L	E	A	I	D	A	G	I	K	L	I	I	T	I	T	E	.	.	.	G	I	P	T	L	D	M	L	T	V	K	V	K	L	D	E	A	G	V	R	M	I
Template Known Secondary structure					.	.	.	.	.												G	G	G											T	T										.	.	.																		T
Template Predicted Secondary structure					.	.	.	.	.																																				.	.	.
Template SS confidence
		60	.	.						.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.				.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions