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Job DescriptionP00562
Confidence98.60%DateThu Jan 5 10:56:45 GMT 2012
Rank97Aligned Residues140
% Identity16%Templatec2ixaA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha-n-acetylgalactosaminidase; PDBTitle: a-zyme, n-acetylgalactosaminidase
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   457..460.........470.........480.........490.........500.........510.........520.... ...
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Query Sequence  KRIGLVLFGKGNIGSRWLELFAREQSTLSARTGFEFVLAGVVDSRRSLLSYDGLDASRALAFFNDEAV. . . . . . . . . EQD
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Template Sequence  KKVRIAFIAVGLRGQTHVENMARR. . . . . . . . . DDVEIVAFAD. . . . . . . . . . PDPYMVGRAQEILKKNGKKPAKVFGNG
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TT




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   1920.........30.........40.. .......50.. .......60.........70.........
 
   528.530.........540.........550.........560.........570.........580.........590.........600.......
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Query Sequence  EESLFLWMRAHPYDDLVVLDVTASQQLADQYLDFASHGFHVISANKLAGASDSNKYRQIHDAFEKTGRHWLYNATVGAGL
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Template Sequence  NDDYKNMLKDKNID. . AVFVSSPWEWHHEHGVAAMKAGKIVGME. . VSGAITLEECWDYVKVSEQTGV. PLMALENVCYR
Template Known Secondary structure  TTTTT
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GGGG
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   80.........90... ......100.........110.........120. ........130.........140... ......150....
 
   608.610.........620
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Query Sequence  PINHTVRDLIDSG
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Template Sequence  RDVMAILNMVRKG
Template Known Secondary structure  TT
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   155....160.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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