Job Description P00562 Confidence 53.31% Date Thu Jan 5 10:56:45 GMT 2012 Rank 500 Aligned Residues 148 % Identity 14% Template c2gx8B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:nif3-related protein; PDBTitle: the crystal stucture of bacillus cereus protein related to nif3 Resolution 2.20 Å

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		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	D	D	V	C	L	I	E	F	Q	V	P	A	S	Q	D	F	K	L	A	H	K	E	I	D	Q	I	L	K	R	A	Q	V	R	P	L	A	V	G	V	H	N	D	R	Q	L	L	Q	F	C	Y	T	S	E	V	A	D	S	A	L	K	I	L	D	E	A	G	L	P	G	E	L	R	L	R	Q	G	L	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	D	I	A	I	Y	A	A	H	T	N	V	D	V	A	K	G	G	V	N	D	L	L	A	E	A	L	G	L	Q	N	T	E	V	L	A	P	T	Y	A	E	E	M	K	K	V	V	V	F	V	P	V	T	H	A	E	E	V	R	K	A	L	G	D	A	G	A	G	H	I	G	N	Y	S	H	C	T	F	S
Template Known Secondary structure			T	T													S	T	T	S										T																								G	G	G											T	T				B	T	T	B		S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.								.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.
Query Sequence		V	A	M	V	G	A	G	V	T	R	N	P	L	H	C	H	R	F	W	Q	Q	L	K	G	Q	P	V	E	F	T	W	Q	S	D	D	G	I	S	L	V	A	V	L	R	T	G	P	T	E	S	L	I	Q	G	L	H	Q	S	V	F	R	A	E	K	R	I	G	L	V	L	F	.	.	.	.	.	.	.	G	K
Query Conservation																																																																									.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	G	T	G	T	F	V	P	Q	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	R	V	E	E	V	R	I	E	T	I	I	P	A	S	L	Q	R	K	V	I	K	A	M	V	T	A	H	P	Y	E	E	V	A	Y	D	V	Y	P	L	D	N	K	G	E	T	L	G	L
Template Known Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															G	G	G										T	T		S	S	S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.																				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		467	.	.	470									.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure						.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.
Query Sequence		G	N	I	G	.	.	.	.	.	.	.	.	S	R	W	L	E	L	F	A	R	E
Query Conservation						.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	I	G	Y	L	Q	E	E	M	T	L	G	Q	F	A	E	H	V	K	Q	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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