Job Description P00562 Confidence 98.39% Date Thu Jan 5 10:56:45 GMT 2012 Rank 108 Aligned Residues 139 % Identity 18% Template c2axqA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:saccharopine dehydrogenase; PDBTitle: apo histidine-tagged saccharopine dehydrogenase (l-glu2 forming) from saccharomyces cerevisiae Resolution 1.70 Å

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		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.							.	.	.	.	530	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.
Query Sequence		G	L	V	L	F	G	K	G	N	I	G	S	R	W	L	E	L	F	A	R	E	Q	S	T	L	S	A	R	T	G	F	E	F	V	L	A	G	V	V	D	S	R	R	S	L	L	S	Y	D	G	L	D	A	S	R	A	L	A	F	F	N	D	E	A	V	E	.	.	.	.	.	.	Q	D	E	E	S	L	F	L
Query Conservation																																																																				.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.							.					.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.							.					.	.	.	.	.	.	.	.	.	.
Template Sequence		N	V	L	L	L	G	S	G	F	V	A	Q	P	V	I	D	T	L	A	A	N	.	.	.	.	.	.	.	.	.	D	D	I	N	V	T	.	V	A	C	R	.	.	.	.	.	.	.	.	.	.	T	L	A	N	A	Q	A	L	A	K	P	S	G	S	K	A	I	S	L	D	V	T	D	D	S	A	L	D	K
Template Known Secondary structure									S	T	T										T	S	.	.	.	.	.	.	.	.	.	T	T					.				S	.	.	.	.	.	.	.	.	.	.	S									G	G	G	T								T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.							.					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.										.	.	.	.	.	30		.	.	.	.											.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.				.	.	.	610
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence		W	M	R	A	H	P	Y	D	D	L	V	V	L	D	V	T	A	S	Q	Q	L	A	D	Q	Y	L	D	F	A	S	H	G	F	H	V	I	S	A	N	K	L	A	G	A	S	D	S	N	K	Y	R	Q	I	H	D	A	F	E	K	T	G	R	H	W	L	Y	N	A	T	V	G	A	G	.	.	.	L	P	I	N
Query Conservation																																																																											.	.	.
Alig confidence								.	.	.	.																														.	.	.	.	.																														.	.	.
Template Conservation								.	.	.	.																														.	.	.	.	.
Template Sequence		V	L	A	D	N	D	.	.	.	.	V	V	I	S	L	I	P	Y	T	F	H	P	N	V	V	K	S	A	I	R	T	K	T	D	V	V	T	S	S	.	.	.	.	.	Y	I	S	P	A	L	R	E	L	E	P	E	I	V	K	A	G	I	T	V	M	N	E	I	G	L	D	P	G	I	D	H	L	Y	A	V
Template Known Secondary structure					T	S	S	.	.	.	.						S		G	G	G												T							S	.	.	.	.	.																	T						S		B	B	T	T	B
Template Predicted Secondary structure								.	.	.	.																														.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	T	V	R	D	L	I	D	S	G	D	T	I	L	S	I	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	I	D	E	V	H	R	A	G	G	K	L	K	S	F	L
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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