Return to main results Retrieve Phyre Job Id

Job DescriptionP00562
Confidence61.40%DateThu Jan 5 10:56:45 GMT 2012
Rank457Aligned Residues114
% Identity11%Templatec1wpqB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:glycerol-3-phosphate dehydrogenase [nad+], PDBTitle: ternary complex of glycerol 3-phosphate dehydrogenase 12 with nad and dihydroxyactone
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   460.........470.........480.........490.........500.........510.........520.........530.........
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  GLVLFGKGNIGSRWLELFAREQSTLSARTGFEFVLAGVVDSRRSLLSYDGLDASRALAFFNDEAVEQDEESLFLWMRAHP
Query Conservation   
 
 
 
 

      
      
    
  
 
  
  
   
    

                             
Alig confidence 


























.



















































Template Conservation 

 




  
   
  
   
  
  .    
                 
                  
    
  
  
Template Sequence  KVCIVGSGNWGSAIAKIVGGNAAQLAQ. FDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDVVQAA
Template Known Secondary structure 

S
SS.



TT


TTTSTT



TTS
Template Predicted Secondary structure 





.



















Template SS confidence 















































































   5....10.........20.........30. ........40.........50.........60.........70.........80...
 
   540.........550.........560 .........570....
Predicted Secondary structure 







...







Query SS confidence 




















. . .













Query Sequence  YDDLVVLDVTASQQLADQYLD. . . FASHGFHVISANKL
Query Conservation      



 
           ...

  
 






 
Alig confidence 




















...













Template Conservation     
 


 
 
         
   
     

   

Template Sequence  EDADILIFVVPHQFIGKICDQLKGHLKANPTGISLIKG
Template Known Secondary structure  TT
S
S
TT
S
SS




Template Predicted Secondary structure 











Template SS confidence 





































   84.....90.........100.........110.........120.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions