 |
Job Description | P00562 | Confidence | 96.80% | Date | Thu Jan 5 10:56:45 GMT 2012 |
Rank | 169 | Aligned Residues | 103 |
% Identity | 15% | Template | c1vm6B_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:dihydrodipicolinate reductase; |
PDBTitle: crystal structure of dihydrodipicolinate reductase (tm1520) from2 thermotoga maritima at 2.27 a resolution
|
Resolution | 2.27 Å |
|
 |
  |   |
456 | . | . | . | 460 | . | . | . | . | . | . | |
. | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | R | I | G | L | V | L | F | G | K | . |
G | N | I | G | S | R | W | L | E | L | F | A | R | E | Q | S | T | L | S | A | R | T | G | F | E | F | V | L | A | G | V | V | D | S | R | R | S | L | L | S | Y | D | G | L | D | A | S | R | A | L | A | F | F | N | D | E | A | V | E | Q | D | E | E | S | L | F | L | W |
Query Conservation |   |
|
|   |
|   |
|   |
|   |
|   | . |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |   |
|
|
|   |
|   |
|   |   |
|
|
|
|   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
H | H | H | M | K | Y | G | I | V | G | Y | S | G | R | M | G | Q | E | I | Q | K | V | F | S | E | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | H | E | L | V | L | K | V | D | V | N | G | V | E | E | L | D | S | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
| S | S |
|  |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | . | . | T |
|  |  |  |  |  |  |  | T | T |  |  |  |  |
| S |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|