Return to main results Retrieve Phyre Job Id

Job DescriptionP00562
Confidence73.93%DateThu Jan 5 10:56:45 GMT 2012
Rank372Aligned Residues78
% Identity13%Templatec1pjcA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:protein (l-alanine dehydrogenase); PDBTitle: l-alanine dehydrogenase complexed with nad
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   402.......410.........420.... .....430.........440.........450........ .460...
Predicted Secondary structure 







...








...............
Query SS confidence 






















. . .

































. . . . . . . . . . . . . . .




Query Sequence  TRNPLHCHRFWQQLKGQPVEFTW. . . QSDDGISLVAVLRTGPTESLIQGLHQSVFRAEKR. . . . . . . . . . . . . . . IGLVL
Query Conservation      

  

   
    
  
 ... 
 

  

 

   
   

  

  

 


 ...............
 
 
Alig confidence 






















...

































...............




Template Conservation            
      

     
       
         


      
                    
    
 
Template Sequence  YLHLAAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGARFLERQQGGRGVLLGGVPGVKPGKVVI
Template Known Secondary structure 


GGG
T
GGG


TTS

TTTTSGGGTS



TT
BTTB


Template Predicted Secondary structure 
































Template SS confidence 















































































   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   464.....470.........
Predicted Secondary structure 



Query SS confidence 















Query Sequence  FGKGNIGSRWLELFAR
Query Conservation   
 
 

      
  
Alig confidence 















Template Conservation 

 
 

  

     
Template Sequence  LGGGVVGTEAAKMAVG
Template Known Secondary structure 

S
Template Predicted Secondary structure 


Template SS confidence 















   173......180........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions