Job Description P00562 Confidence 66.92% Date Thu Jan 5 10:56:45 GMT 2012 Rank 430 Aligned Residues 107 % Identity 16% Template c1oi7A_ PDB info PDB header:synthetase Chain: A: PDB Molecule:succinyl-coa synthetase alpha chain; PDBTitle: the crystal structure of succinyl-coa synthetase alpha2 subunit from thermus thermophilus Resolution 1.23 Å

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		460	.	.	.	.	.	.		.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		G	L	V	L	F	G	K	.	G	N	I	G	S	R	W	L	E	L	F	A	R	E	Q	S	T	L	S	A	R	T	G	F	E	F	V	L	A	G	V	V	D	S	R	R	S	L	L	S	Y	D	G	L	D	A	S	R	A	L	A	F	F	N	D	E	A	V	E	Q	D	E	E	S	L	F	L	W	M	R	A	H
Query Conservation									.
Alig confidence									.														.	.	.	.	.	.	.	.				.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.				.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	L	V	Q	G	I	T	G	R	E	G	Q	F	H	T	K	Q	M	L	T	.	.	.	.	.	.	.	.	Y	G	T	.	.	K	I	V	A	G	V	T	P	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	M	E	V	L	G	V	P	V	Y	D	T	V	K	E	A	V	A	H	H
Template Known Secondary structure							T	T	T	S													.	.	.	.	.	.	.	.		T		.	.								T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T				T	T					S	S								S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.				.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.									30	.	.			.	.	.	.	.	.	.	40	.	.																.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.				.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		P	Y	D	D	L	V	V	L	D	V	T	A	S	Q	Q	L	A	D	Q	Y	L	D	F	A	S	H	G	F	H	.	.	.	V	I	S	A	N	K	L	A	G	A	S	D	S	N	K	Y	R	Q	I	H	D	A	F	E	K	T	G	R	H	W	L
Query Conservation																															.	.	.
Alig confidence					.	.																									.	.	.											.	.	.	.	.
Template Conservation					.	.																																						.	.	.	.	.
Template Sequence		E	V	D	.	.	A	S	I	I	F	V	P	A	P	A	A	A	D	A	A	L	E	A	A	H	A	G	I	P	L	I	V	L	I	T	E	G	I	P	T	L	D	.	.	.	.	.	M	V	R	A	V	E	E	I	K	A	L	G	S	R	L	I
Template Known Secondary structure				S	.	.																					T	T		S							S							.	.	.	.	.												T
Template Predicted Secondary structure					.	.																																						.	.	.	.	.
Template SS confidence
		64	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.						.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions