 |
Job Description | P00562 | Confidence | 82.11% | Date | Thu Jan 5 10:56:45 GMT 2012 |
Rank | 302 | Aligned Residues | 96 |
% Identity | 20% | Template | c1ks9A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:2-dehydropantoate 2-reductase; |
PDBTitle: ketopantoate reductase from escherichia coli
|
Resolution | 1.70 Å |
|
 |
  |   |
459 | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | G | L | V | L | F | G | K | G | N | I | G | S | R | W | L | E | L | F | A | R | E | Q | S | T | L | S | A | R | T | G | F | E | F | V | L | A | G | V | V | D | S | R | R | S | L | L | S | Y | D | G | L | D | A | S | R | A | L | A | F | F | N | D | E | A | V | E | Q | D | E | E | S | L | F | L | W | M | R | A | H |
Query Conservation |   |
|   |
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
Template Conservation |   |
|
|
|   |
|
|
|   |
|   |
|
|   |   |   |
|   |   |
|   |   |   | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |
Template Sequence |   |
M | K | I | T | V | L | G | C | G | A | L | G | Q | L | W | L | T | A | L | C | K | Q | . |
. |
. |
. |
. |
. |
. |
. |
G | H | E | V | Q | G | W | L | R | V | P | Q | P | Y | C | S | V | N | L | V | E | T | D | G | S | . |
. |
. |
. |
I | F | N | E | S | L | T | A | N | D | P | D | F | L | A | . |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
|  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | . | . | . | . | . | . | . | . | T |
|  |  |  |  |  |
| S | S |
|
| S |  |  |  |  |  |  |  |
| T | T | S |
| . | . | . | . |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . |
|
|
|
|  |  |  |
|
|  |  |  |  |  |
| . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | |
|
|
|
|
|
  |
  |   |
539 | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | |
|
|
. | . | . | . | . | . | . | . | 570 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . |  |  |
|
|
|
|  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | Y | D | D | L | V | V | L | D | V | T | A | S | Q | Q | L | A | D | Q | Y | L | D | F | . |
. |
. |
A | S | H | G | F | H | V | I | S | A | N | K | L |
Query Conservation |   |
  |   |   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
| . | . | . |
|   |   |
|   |
|
|
|
|
|
|
|   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |   |   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |   |
|
Template Sequence |   |
. |
. |
T | S | D | L | L | L | V | T | L | K | A | W | Q | V | S | D | A | V | K | S | L | A | S | T | L | P | V | T | T | P | I | L | L | I | H | N | G |
Template Known Secondary structure |   |
. | . | T |
| S |  |  |  |  |
| S |
| G | G | G |  |  |  |  |  |  |  |  |  | T | T | S |
| T | T | S |
|  |  |  |  |
| S | S |
Template Predicted Secondary structure |   |
. | . |
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|