Job Description P00562 Confidence 97.24% Date Thu Jan 5 10:56:45 GMT 2012 Rank 154 Aligned Residues 117 % Identity 21% Template c1k5hB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:1-deoxy-d-xylulose-5-phosphate reductoisomerase; PDBTitle: 1-deoxy-d-xylulose-5-phosphate reductoisomerase Resolution 2.50 Å

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		460	.	.	.	.	.		.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure								.																																																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.																																																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	V	L	F	G	.	K	G	N	I	G	S	R	W	L	E	L	F	A	R	E	Q	S	T	L	S	A	R	T	G	F	E	F	V	L	A	G	V	V	D	S	R	R	S	L	L	S	Y	D	G	L	D	A	S	R	A	L	A	F	F	N	D	E	A	V	E	Q	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation								.																																																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.														.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	T	I	L	G	S	T	G	S	I	G	C	S	T	L	D	V	V	R	.	.	.	.	.	.	.	.	H	N	P	E	H	F	R	V	V	A	L	V	A	G	K	.	.	.	.	.	.	.	.	.	N	V	T	R	M	V	E	Q	C	L	E	F	S	P	R	Y	A	V	M	D	D	E	A	S	A	K	L	L
Template Known Secondary structure							T	T	T	S												.	.	.	.	.	.	.	.	T		T	T	T									S	S	.	.	.	.	.	.	.	.	.												T			S					S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.									.	.	.	.	.	.	.	30	.	.	.	.	.	.	.										.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
																	527	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	E	S	L	F	L	W	M	R	A	H	P	Y	D	D	L	V	V	L	D	V	T	A	S	Q	Q	L	A	D	Q	Y	L	D	F	A	S	H	G	F	H	V	I	S	A	N	K	L	A	G	A	S	D	S	N	K	Y	R	Q	I	H	D	A	F	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.																																			.	.	.
Template Conservation																																.	.																																			.	.	.
Template Sequence		K	T	M	L	Q	Q	Q	G	S	R	T	E	V	L	S	G	Q	Q	A	A	C	D	M	A	A	L	E	D	V	D	.	.	Q	V	M	A	A	I	V	G	A	A	G	L	L	P	T	L	A	A	I	R	A	G	K	T	I	L	L	A	N	K	E	S	L	V	.	.	.	T	C	G	R	L	F	M	D	A	V	K
Template Known Secondary structure							T	T	T								S								T	T		S	S			.	.								S	G	G	G										T	T								T					.	.	.
Template Predicted Secondary structure																																.	.																																			.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140
		592	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	G	R	H	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	S	K	A	Q	L	L
Template Known Secondary structure				T
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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