Job Description P00562 Confidence 100.00% Date Thu Jan 5 10:56:45 GMT 2012 Rank 7 Aligned Residues 348 % Identity 33% Template c1ebuA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: homoserine dehydrogenase complex with nad analogue and l-2 homoserine Resolution 2.60 Å

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		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.				.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		A	E	K	R	I	G	L	V	L	F	G	K	G	N	I	G	S	R	W	L	E	L	F	A	R	E	Q	S	T	L	S	A	R	T	G	F	E	F	V	L	A	G	V	V	D	S	R	R	S	L	L	S	Y	D	G	L	D	A	S	R	.	.	.	A	L	A	F	F	N	D	E	A	V	E	Q	D	E	E	S	L
Query Conservation																																																														.	.	.
Alig confidence																												.	.	.	.	.	.																													.	.	.
Template Conservation																												.	.	.	.	.	.
Template Sequence		S	T	K	V	V	N	V	A	V	I	G	A	G	V	V	G	S	A	F	L	D	Q	L	L	A	M	.	.	.	.	.	.	K	S	T	I	T	Y	N	L	V	L	L	A	E	A	E	R	S	L	I	S	K	D	F	S	P	L	N	V	G	S	D	W	K	A	A	L	A	A	S	T	T	K	T	L	P	L	D	D
Template Known Secondary structure				S										S												T		.	.	.	.	.	.			S	S										S	S	B					T	T		S			T	T	T	T												B
Template Predicted Secondary structure																												.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.							.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	W	M	R	A	H	P	Y	D	D	L	V	V	L	D	V	T	A	S	Q	Q	L	A	D	Q	Y	L	D	F	A	S	H	G	F	H	V	I	S	A	N	K	L	A	G	A	S	D	S	N	K	Y	R	Q	I	H	D	A	F	E	K	T	G	R	H	W	L	Y	N	A	T	V	G	A	G	L	P	I	N	H
Query Conservation
Alig confidence																																																																		.
Template Conservation																																																																		.
Template Sequence		L	I	A	H	L	K	T	S	P	K	P	V	I	L	V	D	N	T	S	S	A	Y	I	A	G	F	Y	T	K	F	V	E	N	G	I	S	I	A	T	P	N	K	K	A	F	S	S	D	L	A	T	W	K	A	L	F	S	N	K	P	T	N	G	F	.	V	Y	H	E	A	T	V	G	A	G	L	P	I	I	S
Template Known Secondary structure							T	T		S	S								S							T	T							T	T									T	T	T	S	S		S							T	S			S	S	S			.				G	G	G	S	S	T	T	S	T	T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.					.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.		.	.
Predicted Secondary structure																																	.	.	.	.																																											.
Query SS confidence																																	.	.	.	.																																											.
Query Sequence		T	V	R	D	L	I	D	S	G	D	T	I	L	S	I	S	G	I	F	S	G	T	L	S	W	L	F	L	Q	F	D	.	.	.	.	G	S	V	P	F	T	E	L	V	D	Q	A	W	Q	Q	G	L	T	E	P	D	P	R	D	D	L	S	G	K	D	V	M	R	K	L	V	I	L	A	R	E	A	.	G	Y
Query Conservation																																	.	.	.	.																																											.
Alig confidence																																	.	.	.	.																																											.
Template Conservation
Template Sequence		F	L	R	E	I	I	Q	T	G	D	E	V	E	K	I	E	G	I	F	S	G	T	L	S	Y	I	F	N	E	F	S	T	S	Q	A	N	D	V	K	F	S	D	V	V	K	V	A	K	K	L	G	Y	T	E	P	D	P	R	D	D	L	N	G	L	D	V	A	R	K	V	T	I	V	G	R	I	S	G	V	E
Template Known Secondary structure										T																						S		S	S																T	T		S		S	S	T					T																T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		687	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.		.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.		.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.
Predicted Secondary structure																						.																																						.
Query SS confidence																						.																																						.
Query Sequence		N	I	E	P	D	Q	V	R	V	E	S	L	V	P	A	H	C	E	G	G	.	S	I	D	H	F	F	E	N	G	D	E	L	N	E	Q	M	V	Q	R	L	E	A	A	R	E	M	G	L	V	L	R	Y	V	A	R	F	D	.	A	N	G	K	A	R	V	G	V	E	A	V	R	E	D	H	P	L	A	S	L
Query Conservation																						.																																						.
Alig confidence																						.																																						.
Template Conservation
Template Sequence		V	E	S	P	T	S	F	P	V	Q	S	L	I	P	K	P	L	E	S	V	K	S	A	D	E	F	L	E	K	L	S	D	Y	D	K	D	L	T	Q	L	K	K	E	A	A	T	E	N	K	V	L	R	F	I	G	K	V	D	V	A	T	K	S	V	S	V	G	I	E	K	Y	D	Y	S	H	P	F	A	S	L
Template Known Secondary structure					T	T	S	S		B				S		T	T	G	G	G			S	T	T							G	G	G														T	T											T	T	T	T											T	T	S	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		765	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	C	D	N	V	F	A	I	E	S	R	W	Y	R	D	N	P	L	V	I	R	G	P	G	A	G	R	D	V	T	A	G	A	I	Q	S	D	I	N	R	L	A	Q	L	L
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		K	G	S	D	N	V	I	S	I	K	T	K	R	Y	T	N	.	P	V	V	I	Q	G	A	G	A	G	A	A	V	T	A	A	G	V	L	G	D	V	I	K	I	A	Q	R	L
Template Known Secondary structure			T	T									S	S		S	S	.
Template Predicted Secondary structure																		.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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