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Job DescriptionP00562
Confidence73.09%DateThu Jan 5 10:56:45 GMT 2012
Rank380Aligned Residues123
% Identity12%Templatec1dxyA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:d-2-hydroxyisocaproate dehydrogenase; PDBTitle: structure of d-2-hydroxyisocaproate dehydrogenase
Resolution1.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   460.........470.........480.........490.........500.........510.........520........
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Query Sequence  GLVLFGKGNIGSRWLELFAREQSTLSARTGFEFVLAGVVDSRRSLLSYDGLDASRALAFFNDEAVEQDE. . . . . . . . . . .
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Template Sequence  TVGVMGTGHIGQVAIKLFKG. . . . . . . . FGAKVIAYDPYPMKGDHPDFDYVSLEDLFKQSDVIDLHVPGIEQNTHIINEA
Template Known Secondary structure 

S........TT

SS

SS

TT



S




GGGTTSB
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   147..150.........160...... ...170.........180.........190.........200.........210........
 
   529530.........540.........550..... ....560.........570....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . ESLFLWMRAHPYDDLVVLDVTASQQLA. . . . . . . . . . . . DQYLDFASHGFHVISANKL
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Template Sequence  AFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAG. VGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVLSPHIA
Template Known Secondary structure  S
TT
S
TTSB
TTS.SS
TTSS


T
TT
SS
T
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   219220.........230.........240.........250.... .....260.........270.........280.........290.......
 
   575....580.........590...
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Query Sequence  AGASDSNKYRQIHDAFEKT
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Template Sequence  YYTE. . TAVHNMVYFSLQH
Template Known Secondary structure  T
S..
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   298.300. ........310....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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