Job Description P00562 Confidence 97.86% Date Thu Jan 5 10:56:45 GMT 2012 Rank 129 Aligned Residues 95 % Identity 18% Template c1cf2Q_ PDB info PDB header:oxidoreductase Chain: Q: PDB Molecule:protein (glyceraldehyde-3-phosphate PDBTitle: three-dimensional structure of d-glyceraldehyde-3-phosphate2 dehydrogenase from the hyperthermophilic archaeon3 methanothermus fervidus Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	G	L	V	L	F	G	K	G	N	I	G	S	R	W	L	E	L	F	A	R	E	Q	S	T	L	S	A	R	T	G	F	E	F	V	L	A	G	V	V	D	S	R	R	S	L	L	S	Y	D	G	L	D	A	S	R	A	L	A	F	F	N	D	E	A	V	E	Q	D	E	E	S	L	F	L	W	M	R	A
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template Sequence		M	K	A	V	A	I	N	G	Y	G	T	V	G	K	R	V	A	D	A	I	A	Q	Q	.	.	.	.	.	.	.	.	.	D	D	M	K	V	I	G	V	S	K	T	R	P	.	.	.	.	.	.	.	.	D	F	E	A	R	M	A	L	K	K	G	Y	D	L	Y	V	A	I	P	E	R	V	K	L	F	E	K
Template Known Secondary structure											S	T	T											S	.	.	.	.	.	.	.	.	.	T	T									S	S		.	.	.	.	.	.	.	.	S									T	T						S	S	G	G	G
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.										.	.	.	.	.	.	30	.	.	.	.	.	.									.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		538	.	540												.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	P	Y	.	.	.	.	.	.	.	.	.	.	.	D	D	L	V	V	L	D	V	T	A	S	Q	Q	L	A	D	Q	Y	L	D	F	A	S	H	G	F	H	V	I
Query Conservation					.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	I	E	V	A	G	T	V	D	D	M	L	D	E	A	D	I	V	I	D	C	T	P	E	G	I	G	A	K	N	L	K	M	Y	K	E	K	G	I	K	A	I
Template Known Secondary structure		T	T													T		S								T	T													T
Template Predicted Secondary structure
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions