Job Description P00562 Confidence 97.86% Date Thu Jan 5 10:56:45 GMT 2012 Rank 130 Aligned Residues 136 % Identity 18% Template c1bvuF_ PDB info PDB header:oxidoreductase Chain: F: PDB Molecule:protein (glutamate dehydrogenase); PDBTitle: glutamate dehydrogenase from thermococcus litoralis Resolution 2.50 Å

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		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	S	L	I	Q	G	L	H	Q	S	V	F	R	A	E	K	R	I	G	L	V	L	F	G	K	G	N	I	G	S	R	W	L	E	L	F	A	R	E	Q	S	T	L	S	A	R	T	G	F	E	F	V	L	A	G	V	V	D	S	R	R	S	L	L	S	Y	D	G	L	D	A	S	R	A	L	A	F	F	N
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.
Template Sequence		A	S	Y	T	V	R	E	A	A	K	A	L	G	M	D	L	K	G	K	T	I	A	I	Q	G	Y	G	N	A	G	Y	Y	M	A	K	I	M	S	E	E	.	.	.	.	.	.	.	.	.	Y	G	M	K	V	V	A	V	S	D	T	K	G	G	I	Y	N	P	D	G	L	N	A	D	E	V	L	A	W	K	K
Template Known Secondary structure													T	T				T	T									S													T	.	.	.	.	.	.	.	.	.	T										T	T						T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.										.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		521									.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.																	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570				.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Query SS confidence			.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Query Sequence		D	.	.	.	.	.	.	.	.	E	A	V	E	Q	D	E	E	S	L	F	L	W	M	R	A	H	P	Y	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	V	V	L	D	V	T	A	S	Q	Q	L	A	D	Q	Y	L	D	F	A	S	H	G	F	H	V	I	S	.	.	.	A	N	K
Query Conservation			.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Alig confidence			.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Conservation
Template Sequence		K	T	G	S	V	K	D	F	P	G	A	T	N	I	T	N	E	E	L	L	E	L	E	V	D	V	L	A	P	S	A	I	E	E	V	I	T	K	K	N	A	D	N	I	K	A	K	I	V	A	E	L	A	N	G	P	T	T	P	E	A	D	E	I	L	Y	E	K	G	I	L	I	I	P	D	F	L	C	N	A
Template Known Secondary structure				S	S	S	T	T		T	T	S										T	S			S						S		S	S		B						T	T				S						S	S			B											T	T										T
Template Predicted Secondary structure
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
		574	.	.	.	.	.	580	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	G	A	S	D	S	N	K	Y	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	V	T	V	S	Y	F	E	W	V	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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