 |
Job Description | P07623 | Confidence | 68.09% | Date | Thu Jan 5 11:00:22 GMT 2012 |
Rank | 76 | Aligned Residues | 106 |
% Identity | 8% | Template | c3qvjB_ |
PDB info |
PDB header:isomerase | Chain: B: PDB Molecule:putative hydantoin racemase; |
PDBTitle: allantoin racemase from klebsiella pneumoniae
|
Resolution | 2.10 Å |
|
 |
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
|
|
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . | . |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | V | L | I | L | N | L | M | P | K | K | I | E | T | E | N | Q | F | L | R | L | L | S | N | S | P | L | Q | V | D | I | Q | L | L | R | I | D | S | R | E | S | R | N | T | P | A | E | H | L | N | N | . |
. |
. |
. |
F | Y | C | N | F | E | D | I | Q | D | Q | N | F | D | G | L | I | V | T | G | A | P | L | G |
Query Conservation |   |
|   |
|   |
|
|
|
|
|
|   |
|   |   |
|
|   |
|   |   |
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . |   |
|   |   |   |   |   |
|   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
|
|
|   |
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   | . | . | . |
Template Sequence |   |
V | R | I | Q | V | I | N | P | N | T | S | L | A | X | T | E | T | I | G | A | A | A | R | A | V | A | A | P | G | T | E | I | L | A | V | C | P | R | A | G | V | P | S | I | E | G | H | F | D | E | A | I | A | A | V | G | V | L | E | Q | I | R | A | G | R | E | Q | G | V | D | G | H | V | I | A | C | F | . |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T |  |  |  |  |  |  |
|
| S | S | S |
| S | S |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
| S | T | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
| . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | |
|
|
  |
  |   |
112 | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | V | E | F | N | D | V | A | Y | W | P | Q | I | K | Q | V | L | E | W | S | K | D | H | V | T | S | T | L | F | V | C | W | A | V | Q | A | A | L | N | I | L | Y | G | I |
Query Conservation |   |
  |   |   |
|
|   |
|   |
|
|   |
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|   |
|   |   |
|   |
|
|
Alig confidence |   |
. | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . |
|   |   |   |
|   |   |
|
|   |   |   | . | . | . | . | . | . |   |
|
|
|
|
|
|   |
|
|   |   |   |   |
|   |   |   |
|   |
|
Template Sequence |   |
. |
. |
. |
. |
. |
G | D | P | G | L | L | A | A | R | E | L | A | . |
. |
. |
. |
. |
. |
Q | G | P | V | I | G | I | A | E | A | A | X | H | X | A | T | X | V | A | T | R |
Template Known Secondary structure |   |
. | . | . | . | . | T |
| T | T |  |  |  |  |  |  |  |
| . | . | . | . | . | . | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |
|
Template Predicted Secondary structure |   |
. | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
81 | . | . | . | . | . | . | . | . | 90 | . | . | |
|
|
|
|
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|