Job Description P07623 Confidence 99.62% Date Thu Jan 5 11:00:22 GMT 2012 Rank 22 Aligned Residues 141 % Identity 18% Template c3fijD_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:lin1909 protein; PDBTitle: crystal structure of a uncharacterized protein lin1909 Resolution 2.30 Å

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		98	.	100	.	.	.	.	.	.	.	.												.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	N	F	D	G	L	I	V	T	G	A	.	.	.	.	.	.	.	.	.	.	.	P	L	G	L	V	E	F	N	D	V	A	Y	W	P	Q	I	K	Q	V	L	E	W	S	K	D	H	V	T	S	T	L	F	V	C	W	A	V	Q	A	A	L	N	I	L	Y	G	I	P	K	Q	T	R	T	E	K	L	S	G
Query Conservation													.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	V	D	G	L	L	L	T	G	G	Q	D	I	T	P	Q	L	Y	L	E	E	P	S	Q	E	I	G	A	Y	F	P	P	R	D	S	Y	E	I	A	L	V	R	A	A	L	D	A	G	K	P	I	F	A	I	C	R	G	X	Q	L	V	N	V	A	L	G	G	T	L	Y	Q	D	I	S	Q	V	E	T	K
Template Known Secondary structure			T		S								S				G	G	G	G	T					T	T																							T							T										T	T					S	S	G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		167	.	.													170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.
Query Sequence		V	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	H	H	I	L	H	P	H	A	L	L	T	R	G	F	D	D	S	F	L	A	P	H	S	R	Y	A	D	F	P	A	A	L	I	R	D	Y	T	D	L	E	I	L	A	E	T	E	E	G	D	A	Y	L	F	A	S	K	D	K	R	.	.	I	A	F	V
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.																																																												.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.																																				.	.
Template Conservation																																					.	.	.	.
Template Sequence		A	L	Q	H	L	Q	R	V	D	E	Q	L	G	S	H	T	I	D	I	E	P	T	S	E	L	A	K	H	H	P	N	K	K	L	V	.	.	.	.	N	S	L	H	H	Q	F	I	K	K	L	A	P	S	F	K	V	T	A	R	T	A	D	G	X	I	E	A	V	E	G	D	N	L	P	S	W	Y	L	G	V
Template Known Secondary structure						B			S		T	T	S									T	T	S	T	G	G	G	T	S		T	T				.	.	.	.			B		S					S			T	T								T	T									S	S		S	S
Template Predicted Secondary structure																																					.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	H	P	E	Y	D	A	Q	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	W	H	P	E	L	X	F	Q	T
Template Known Secondary structure		S	S		G	G	G	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		216	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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